Evidence map›Paper›PMID 32317694›Full record

ArticleScientific reports2020

Identification of tipifarnib sensitivity biomarkers in T-cell acute lymphoblastic leukemia and T-cell lymphoma.

Ruth Alonso-Alonso, Rufino Mondéjar, Nerea Martínez, Nuria García-Diaz, Cristina Pérez, David Merino, Marta Rodríguez, Anna Esteve-Codina, Berta Fuste, Marta Gut and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 2 countries.

Ruth Alonso-Alonso *Departamento Hematopatología Translacional, IDIVAL, Instituto de Investigación Marqués de Valdecilla, Santander, Spain.
Rufino Mondéjar *Departamento Hematopatología Translacional, IDIVAL, Instituto de Investigación Marqués de Valdecilla, Santander, Spain.
Nerea MartínezDepartamento Hematopatología Translacional, IDIVAL, Instituto de Investigación Marqués de Valdecilla, Santander, Spain.
Nuria García-DiazDepartamento de Biología Molecular, Universidad de Cantabria. Infección, Inmunidad y Patología Digestiva, Instituto de Investigación Marqués de Valdecilla-IDIVAL, Santander, Spain.
Cristina PérezDepartamento Hematopatología Translacional, IDIVAL, Instituto de Investigación Marqués de Valdecilla, Santander, Spain.
David MerinoUnidad Citometría de Flujo, IDIVAL, Instituto de Investigación Marqués de Valdecilla, Santander, Spain.
Marta RodríguezCentro de Investigación Biomédica en Red de Cáncer (CIBERONC), Madrid, Spain.
Anna Esteve-CodinaCentro Nacional de Análisis Genómico (CNAG), Parc Científic de Barcelona, Barcelona, Spain.
Berta FusteCNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology, 08028, Barcelona, Spain.
Marta GutCNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology, 08028, Barcelona, Spain.
Francis BurrowsKura Oncology, Inc., San Diego, CA, USA.
Catherine ScholzKura Oncology, Inc., San Diego, CA, USA.
Jose Pedro VaquéDepartamento de Biología Molecular, Universidad de Cantabria. Infección, Inmunidad y Patología Digestiva, Instituto de Investigación Marqués de Valdecilla-IDIVAL, Santander, Spain.
Antonio GualbertoKura Oncology, Inc., San Diego, CA, USA.
Miguel Ángel PirisCentro de Investigación Biomédica en Red de Cáncer (CIBERONC), Madrid, Spain. miguel.piris@quironsalud.es.
Hospital Universitario Fundación Jiménez Díaz · ESInstituto de Investigación Marqués de Valdecilla · ESKura Oncology (United States) · USCentre for Genomic Regulation · ESCentro de Investigación Biomédica en Red de Cáncer · ESCentro Nacional de Análisis Genómico · ESHospital Universitario Puerto Real · ESUniversidad de Cantabria · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Patients diagnosed with T-cell leukemias and T-cell lymphomas (TCLs) still have a poor prognosis and an inadequate response to current therapies, highlighting the need for targeted treatments. We have analyzed the potential therapeutic value of the farnesyltransferase inhibitor, tipifarnib, in 25 TCL cell lines through the identification of genomic and/or immunohistochemical markers of tipifarnib sensitivity. More than half of the cell lines (60%) were considered to be sensitive. Tipifarnib reduced cell viability in these T-cell leukemia and TCL cell lines, induced apoptosis and modified the cell cycle. A mutational study showed TP53, NOTCH1 and DNMT3 to be mutated in 84.6%, 69.2% and 30.0% of sensitive cell lines, and in 62.5%, 0% and 0% of resistant cell lines, respectively. An immunohistochemistry study showed that p-ERK and RelB were associated as potential biomarkers of tipifarnib sensitivity and resistance, respectively. Data from RNA-seq show that tipifarnib at IC

Indexed as

ApoptosisBiomarkers, TumorCell CycleCell Line, TumorCell SurvivalDown-RegulationDrug Resistance, NeoplasmGene Expression Regulation, LeukemicHumansInhibitory Concentration 50Lymphoma, T-CellMutationPhenotypePrecursor T-Cell Lymphoblastic Leukemia-LymphomaQuinolonesSignal TransductionBiomarkers, TumorQuinolonestipifarnib

Identifiers

PMID32317694
PMCPMC7174413
OpenAlexW3017173383

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.