Evidence map›Paper›PMID 32317684›Full record

ArticleScientific reports2020

Application of in vivo solid phase microextraction (SPME) in capturing metabolome of apple (Malus ×domestica Borkh.) fruit.

Sanja Risticevic, Erica A Souza-Silva, Emanuela Gionfriddo, Jennifer R DeEll, Jack Cochran, W Scott Hopkins, Janusz Pawliszyn

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. ACS environmental Au · 2022
    Review
  4. Review
  5. MappingFoods (Basel, Switzerland) · 2021
    Article
  6. Review
  7. 30Analytical science advances · 2021
    Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Sanja RisticevicDepartment of Chemistry, University of Waterloo, 200 University Avenue West, N2L 3G1, Waterloo, Ontario, Canada.
Erica A Souza-SilvaDepartment of Chemistry, University of Waterloo, 200 University Avenue West, N2L 3G1, Waterloo, Ontario, Canada.
Emanuela GionfriddoDepartment of Chemistry, University of Waterloo, 200 University Avenue West, N2L 3G1, Waterloo, Ontario, Canada.ORCID http://orcid.org/0000-0002-1836-1950
Jennifer R DeEllOntario Ministry of Agriculture, Food and Rural Affairs, 1283 Blueline Rd. at Hwy #3, Box 587, N3Y 4N5, Simcoe, Ontario, Canada.
Jack CochranVUV Analytics, 715 Discovery Blvd, Ste 502, 78613, Cedar Park, Texas, USA.
W Scott HopkinsDepartment of Chemistry, University of Waterloo, 200 University Avenue West, N2L 3G1, Waterloo, Ontario, Canada.
Janusz PawliszynDepartment of Chemistry, University of Waterloo, 200 University Avenue West, N2L 3G1, Waterloo, Ontario, Canada. janusz@uwaterloo.ca.
University of Waterloo · CAEP Analytics (United States) · USMinistry of Agriculture, Food and Rural Affairs · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An in vivo direct-immersion SPME sampling coupled to comprehensive two-dimensional gas chromatography - time-of-flight mass spectrometry (GCxGC-ToFMS) was employed to capture real-time changes in the metabolome of 'Honeycrisp' apples during ripening on the tree. This novel sampling approach was successful in acquiring a broad metabolic fingerprint, capturing unique metabolites and detecting changes in metabolic profiles associated with fruit maturation. Several metabolites and chemical classes, including volatile esters, phenylpropanoid metabolites, 1-octen-3-ol, hexanal, and (2E,4E)-2,4-hexadienal were found to be up-regulated in response to fruit maturation. For the first time, Amaryllidaceae alkaloids, metabolites with important biological activities, including anti-cancer, anti-viral, anti-parasitic, and acetylcholinesterase (AChE) inhibitory activity, were detected in apples. Considering the elimination of oxidative degradation mechanisms that adversely impact the representativeness of metabolome obtained ex vivo, and further evidence that lipoxygenase (LOX) pathway contributes to volatile production in intact fruit, in vivo DI-SPME represents an attractive approach for global plant metabolite studies.

Indexed as

MetabolomeDiscriminant AnalysisFruitGas Chromatography-Mass SpectrometryLeast-Squares AnalysisMalusSolid Phase Microextraction

Identifiers

PMID32317684
PMCPMC7174353
OpenAlexW3016910668

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.