Evidence map›Paper›PMID 32317661›Full record

ArticleScientific reports2020

The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion.

Amy L Bottomley, Elizabeth Peterson, Gregory Iosifidis, Adeline Mei Hui Yong, Lauren E Hartley-Tassell, Shirin Ansari, Chris McKenzie, Catherine Burke, Iain G Duggin, Kimberly A Kline and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Adhesion ofFrontiers in molecular biosciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Amy L Bottomleyithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia. Amy.Bottomley@uts.edu.au.
Elizabeth Petersonithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia.
Gregory Iosifidisithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia.
Adeline Mei Hui YongSingapore Centre for Environmental Life Sciences Engineering (SCELSE) and the School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.
Lauren E Hartley-TassellInstitute for Glycomics, Griffith University, Gold Coast, QLD 4222, Mount Gravatt, Australia.
Shirin Ansariithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia.
Chris McKenzieithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia.
Catherine Burkeithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia.
Iain G Dugginithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia.ORCID http://orcid.org/0000-0003-4868-7350
Kimberly A KlineSingapore Centre for Environmental Life Sciences Engineering (SCELSE) and the School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.ORCID http://orcid.org/0000-0002-5472-3074
Elizabeth J Harryithree institute, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Sydney, Australia.ORCID http://orcid.org/0000-0003-0858-9473
University of Technology Sydney · AUNanyang Technological University · SGGriffith University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Characterisation of protein function based solely on homology searches may overlook functions under specific environmental conditions, or the possibility of a protein having multiple roles. In this study we investigated the role of YtfB, a protein originally identified in a genome-wide screen to cause inhibition of cell division, and has demonstrated to localise to the Escherichia coli division site with some degree of glycan specificity. Interestingly, YtfB also shows homology to the virulence factor OapA from Haemophilus influenzae, which is important for adherence to epithelial cells, indicating the potential of additional function(s) for YtfB. Here we show that E. coli YtfB binds to N'acetylglucosamine and mannobiose glycans with high affinity. The loss of ytfB results in a reduction in the ability of the uropathogenic E. coli strain UTI89 to adhere to human kidney cells, but not to bladder cells, suggesting a specific role in the initial adherence stage of ascending urinary tract infections. Taken together, our results suggest a role for YtfB in adhesion to specific eukaryotic cells, which may be additional, or complementary, to its role in cell division. This study highlights the importance of understanding the possible multiple functions of proteins based on homology, which may be specific to different environmental conditions.

Indexed as

AcetylglucosamineBacterial AdhesionCarbohydrate SequenceCell AdhesionCell Cycle ProteinsCell DivisionEscherichia coli InfectionsEscherichia coli ProteinsGene ExpressionHaemophilus influenzaeHEK293 CellsHumansMannansPhylogenyPolysaccharidesProtein BindingAcetylglucosamineCell Cycle ProteinsEscherichia coli ProteinsMannansmannobiosePolysaccharidesVirulence FactorsYtfB protein, E coli

Identifiers

PMID32317661
PMCPMC7174318
OpenAlexW3017297770

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.