Evidence map›Paper›PMID 32316277›Full record

ArticleCells2020

FTO Intronic SNP Strongly Influences Human Neck Adipocyte Browning Determined by Tissue and PPARγ Specific Regulation: A Transcriptome Analysis.

Beáta B Tóth, Rini Arianti, Abhirup Shaw, Attila Vámos, Zoltán Veréb, Szilárd Póliska, Ferenc Győry, Zsolt Bacso, László Fésüs, Endre Kristóf

Open access · greenAbstract read
In one paragraph

Article in Cells, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 2 syntheses or guidelines pooled it, 0 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  8. RNA modifications and their role in gene expression.Frontiers in molecular biosciences · 2025
    Review
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  14. Human abdominal subcutaneous-derived active beige adipocytes carryingFrontiers in cell and developmental biology · 2023
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Search for Possible Associations ofPharmacogenomics and personalized medicine · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Beáta B TóthDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0001-9091-1497
Rini AriantiDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0002-0525-4902
Abhirup ShawDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0003-3390-3364
Attila VámosDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.
Zoltán VerébRegenerative Medicine and Cellular Pharmacology Research Laboratory, Department of Dermatology and Allergology, University of Szeged, H-6720 Szeged, Hungary.ORCID 0000-0002-9518-2155
Szilárd PóliskaDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0002-9722-251X
Ferenc GyőryDepartment of Surgery, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.
Zsolt BacsoDepartment of Biophysics and Cell Biology, Faculties of Medicine and Pharmacology, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0001-6885-3796
László FésüsDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.
Endre KristófDepartment of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary.ORCID 0000-0002-2215-6984
University of Debrecen · HUUniversity of Szeged · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brown adipocytes, abundant in deep-neck (DN) area in humans, are thermogenic with anti-obesity potential. FTO pro-obesity rs1421085 T-to-C single-nucleotide polymorphism (SNP) shifts differentiation program towards white adipocytes in subcutaneous fat. Human adipose-derived stromal cells were obtained from subcutaneous neck (SC) and DN fat of nine donors, of which 3-3 carried risk-free (T/T), heterozygous or obesity-risk (C/C) FTO genotypes. They were differentiated to white and brown (long-term Peroxisome proliferator-activated receptor gamma (PPARγ) stimulation) adipocytes; then, global RNA sequencing was performed and differentially expressed genes (DEGs) were compared. DN and SC progenitors had similar adipocyte differentiation potential but differed in DEGs. DN adipocytes displayed higher browning features according to ProFAT or BATLAS scores and characteristic DEG patterns revealing associated pathways which were highly expressed (thermogenesis, interferon, cytokine, and retinoic acid, with

Indexed as

Adipocytes, WhiteAdipogenesisAdipose Tissue, BrownAdipose Tissue, WhiteAlpha-Ketoglutarate-Dependent Dioxygenase FTOBone Morphogenetic Protein 4Gene Expression ProfilingGene Expression RegulationHumansMitochondriaObesityOxygen ConsumptionPolymorphism, Single NucleotidePPAR gammaRNA-SeqSignal TransductionAlpha-Ketoglutarate-Dependent Dioxygenase FTOBMP4 protein, humanBone Morphogenetic Protein 4FTO protein, humanPPAR gammaUncoupling Protein 1adipocyte browningdeep-neckdifferential gene expression patternsFTO obesity-risk allelePPARγ

Identifiers

PMID32316277
PMCPMC7227023
OpenAlexW3008295900

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.