Evidence map›Paper›PMID 32316166›Full record

ArticleBiomolecules2020

Human vtRNA1-1 Levels Modulate Signaling Pathways and Regulate Apoptosis in Human Cancer Cells.

Lisamaria Bracher, Iolanda Ferro, Carlos Pulido-Quetglas, Marc-David Ruepp, Rory Johnson, Norbert Polacek

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. The small noncoding RNARNA (New York, N.Y.) · 2024
    Article
  9. The small non-coding RNAbioRxiv : the preprint server for biology · 2024
    Article
  10. Human Vault RNAs: Exploring Their Potential Role in Cellular Metabolism.International journal of molecular sciences · 2024
    Review
  11. Crosstalk between vault RNAs and innate immunity.Molecular biology reports · 2024
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Lisamaria BracherDepartment of Chemistry and Biochemistry, University of Bern, 3012 Bern, Switzerland.
Iolanda FerroDepartment of Chemistry and Biochemistry, University of Bern, 3012 Bern, Switzerland.
Carlos Pulido-QuetglasGraduate School for Cellular and Biomedical Sciences, University of Bern, 3012 Bern, Switzerland.
Marc-David RueppDepartment of Chemistry and Biochemistry, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0003-3264-9800
Rory JohnsonDepartment of Medical Oncology, Inselspital, University Hospital and University of Bern, 3010 Bern, Switzerland.
Norbert PolacekDepartment of Chemistry and Biochemistry, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0001-5317-3990
University of Bern · CH

Funding

NCCR RNA and Disease xxxSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 31003A_188969
6 · The paper itself

Abstract

Regulatory non-protein coding RNAs perform a remarkable variety of complex biological functions. Previously, we demonstrated a role of the human non-coding vault RNA1-1 (vtRNA1-1) in inhibiting intrinsic and extrinsic apoptosis in several cancer cell lines. Yet on the molecular level, the function of the vtRNA1-1 is still not fully clear. Here, we created HeLa knock-out cell lines revealing that prolonged starvation triggers elevated levels of apoptosis in the absence of vtRNA1-1 but not in vtRNA1-3 knock-out cells. Next-generation deep sequencing of the mRNome identified the PI3K/Akt pathway and the ERK1/2 MAPK cascade, two prominent signaling axes, to be misregulated in the absence of vtRNA1-1 during starvation-mediated cell death conditions. Expression of vtRNA1-1 mutants identified a short stretch of 24 nucleotides of the vtRNA1-1 central domain as being essential for successful maintenance of apoptosis resistance. This study describes a cell signaling-dependent contribution of the human vtRNA1-1 to starvation-induced programmed cell death.

Indexed as

ApoptosisGene Expression Regulation, NeoplasticGene Knockout TechniquesHEK293 CellsHeLa CellsHigh-Throughput Nucleotide SequencingHumansMAP Kinase Signaling SystemNucleotidesPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktRNA, MessengerRNA, UntranslatedSignal TransductionStarvationNucleotidesPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktRNA, MessengerRNA, Untranslatedapoptosisnon-coding RNAsignalingvault RNA

Identifiers

PMID32316166
PMCPMC7226377
OpenAlexW3016877470

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.