Evidence map›Paper›PMID 32313992›Full record

ArticleArchives of microbiology2020

Analysis of endophytic and rhizosphere bacterial diversity and function in the endangered plant Paeonia ludlowii.

Yazhou Lu, Erhao Zhang, Mingsheng Hong, Xiu Yin, Hao Cai, Lei Yuan, Fang Yuan, Lianqiang Li, Kentian Zhao, Xiaozhong Lan

Open access · hybridAbstract read
In one paragraph

Article in Archives of microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
9.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

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  9. The Relationship between Endophytic Fungi ofJournal of fungi (Basel, Switzerland) · 2024
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  16. The seed oil ofFood science & nutrition · 2021
    Article
  17. Article
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  19. TheFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Yazhou LuResearch Institute of Plateau Ecology, Tibet Agriculture and Animal Husbandry University, Nyingchi, 860000, Tibet, China.ORCID http://orcid.org/0000-0001-8633-1158
Erhao ZhangMedicinal Plants Joint Research and Development Centre, Tibet Agriculture and Animal Husbandry College-Southwest University, Nyingchi, 860000, Tibet, China.
Mingsheng HongKey Laboratory of Southwest China Wildlife Resources Conservation, China West Normal University, Ministry of Education, Nanchong, 637009, Sichuan, China.
Xiu YinMedicinal Plants Joint Research and Development Centre, Tibet Agriculture and Animal Husbandry College-Southwest University, Nyingchi, 860000, Tibet, China.
Hao CaiMedicinal Plants Joint Research and Development Centre, Tibet Agriculture and Animal Husbandry College-Southwest University, Nyingchi, 860000, Tibet, China.
Lei YuanMedicinal Plants Joint Research and Development Centre, Tibet Agriculture and Animal Husbandry College-Southwest University, Nyingchi, 860000, Tibet, China.
Fang YuanMedicinal Plants Joint Research and Development Centre, Tibet Agriculture and Animal Husbandry College-Southwest University, Nyingchi, 860000, Tibet, China.
Lianqiang LiMedicinal Plants Joint Research and Development Centre, Tibet Agriculture and Animal Husbandry College-Southwest University, Nyingchi, 860000, Tibet, China.
Kentian ZhaoDepartment of Resources and Environment, Tibet Agriculture and Animal Husbandry University, Nyingchi, 860000, Tibet, China.
Xiaozhong LanMedicinal Plants Joint Research and Development Centre, Tibet Agriculture and Animal Husbandry College-Southwest University, Nyingchi, 860000, Tibet, China. lanxiaozhong@163.com.
Tibet University · CNChina West Normal University · CN

Funding

Research and formulating of standards for the construction of China wild traditional Chinese medicine resources protection base (Tibet region) 2060302-1702-13State Administration of Traditional Chinese Medicine of the People's Republic of China 20190411-542222The coordinated innovation program for the research and development of Tibet characteristic agricultural and animal resources 502219005Tibet Department of Science and Technology General Scientific Research Project XZ2017ZRG-22
6 · The paper itself

Abstract

Paeonia ludlowii is indigenous to Tibet and has an important ecological and economic value in China. In Tibet, P. ludlowii has been used in folk medicine with relative success. Plant microbial endophytes play an important role in plant growth, health and ecological function. The diversity of endophytic bacteria associated with P. ludlowii remains poorly understood. In this study, the structure of the endophytic bacterial communities associated with different tissues, including fruits, flowers, leaves, stems, and roots, and rhizosphere soils was analyzed with Illumina MiSeq sequencing of bacterial 16S rDNA. A total of 426,240 sequences and 4847 operational taxonomic units (OTUs) were obtained. The OTUs abundance of roots was higher than that of other tissues; however, the OTUs abundance was similar among different deep soil samples. In the plant tissues, Cyanobacteria was the most abundant bacterial phylum, followed by Proteobacteria; however, the most abundant phyla were Proteobacteria and Acidobacteria in soil samples from three different layers. In addition, the diversity and richness of the microorganisms in the soil were very similar to those in roots but higher than those in other tissues of P. ludlowii. Predictive metagenome analysis revealed that endophytic bacteria play critical functional roles in P. ludlowii. This conclusion could facilitate the study of the ecological functions of endophytic bacteria and their interactions with P. ludlowii to analyze the reasons why this important medicinal plant is becoming endangered.

Indexed as

BiodiversityEndangered SpeciesRhizosphereSoil MicrobiologyCyanobacteriaDNA, RibosomalEndophytesHigh-Throughput Nucleotide SequencingPaeoniaPlant RootsProteobacteriaRNA, Ribosomal, 16STibetDNA, RibosomalRNA, Ribosomal, 16SEndophytic bacterial communityIllumina MiSeq sequencingPaeonia ludlowii

Identifiers

PMID32313992
PMCPMC7385006
OpenAlexW3017376486

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.