Evidence map›Paper›PMID 32313131›Full record

ArticleScientific reports2020

Polymorphism of nucleotide binding domain-like receptor protein 3 (NLRP3) increases susceptibility of total urinary arsenic to renal cell carcinoma.

Chi-Jung Chung, Bo-Ying Bao, Ying-Chin Lin, Ya-Li Huang, Horng-Sheng Shiue, Pui-Lam Ao, Yeong-Shiau Pu, Chao-Yuan Huang, Yu-Mei Hsueh

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In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Chi-Jung ChungDepartment of Public Health, College of Public Health, China Medical University, Taichung, Taiwan.
Bo-Ying BaoDepartment of Pharmacy, College of Pharmacy, China Medical University, Taichung, Taiwan.ORCID http://orcid.org/0000-0001-5510-6513
Ying-Chin LinDepartment of Family Medicine, Wan Fang Hospital, Taipei Medical University, Taipei City, Taiwan.
Ya-Li HuangDepartment of Public Health, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.
Horng-Sheng ShiueDepartment of Chinese Medicine, College of Medicine, Chang Gung University Taoyuan, Taoyuan, Taiwan.
Pui-Lam AoSchool of Public Health, College of Public Health, Taipei Medical University, Taipei, Taiwan.
Yeong-Shiau PuDepartment of Urology, National Taiwan University Hospital, College of Medicine National Taiwan University, Taipei, Taiwan.
Chao-Yuan HuangDepartment of Urology, National Taiwan University Hospital, College of Medicine National Taiwan University, Taipei, Taiwan. ymhsueh@tmu.edu.tw.
Yu-Mei HsuehDepartment of Family Medicine, Wan Fang Hospital, Taipei Medical University, Taipei City, Taiwan. cyhuang0909@ntu.edu.tw.
National Taiwan University Hospital · TWTaipei Medical University · TWWan Fang Hospital · TWAsia University · TWChang Gung University · TWChina Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our study showed that total urinary arsenic concentrations were positively correlated with renal cell carcinoma (RCC). Chronic inflammation is a key player in the development of RCC. This study explored the association between nucleotide-binding domain-like receptor protein 3 (NLRP3) genotypes and the development of RCC. We also investigated whether any of the NLRP3 genotypes modified the risk between arsenic and RCC. We recruited 350 RCC patients and 700 age-sex matched controls. RCC was confirmed by pathological assessment following surgical resection or image-guided biopsy of a renal tumor. Fifteen sites of NLRP3 gene polymorphisms were identified using the Agena Bioscience MassARRAY platform. The concentrations of the urinary arsenic species were determined by HPLC-HG-AAS. There was a significant dose-dependent association between arsenic and RCC. In addition, six of thirteen NLRP3 alleles, including rs12239046 C, rs10925025 G, rs1539019 C, rs10925026 A, rs10157379 T, and rs12143966 A, had increased odds ratios (ORs) for RCC than other NLRP3 alleles. Among these sites, we found the novel haplotype of five tag-SNPs (C-A-A-A-A) was significantly related to RCC, the OR and 95% confidence interval was 1.44 (1.08-1.92). Furthermore, participants with high total urinary arsenic levels and the NLRP3 rs1539019 C allele had significantly multiplicative and additive interactions for the risk of RCC (p

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAllelesArsenicCarcinoma, Renal CellCase-Control StudiesFemaleGene ExpressionGene FrequencyHaplotypesHumansInflammationKidney NeoplasmsMaleMiddle AgedNLR Family, Pyrin Domain-Containing 3 ProteinArsenicNLR Family, Pyrin Domain-Containing 3 ProteinNLRP3 protein, human

Identifiers

PMID32313131
PMCPMC7171170
OpenAlexW3016854598

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.