Evidence map›Paper›PMID 32313116›Full record

ArticleCommunications biology2020

Genome-wide association study of Buruli ulcer in rural Benin highlights role of two LncRNAs and the autophagy pathway.

Jeremy Manry, Quentin B Vincent, Christian Johnson, Maya Chrabieh, Lazaro Lorenzo, Ioannis Theodorou, Marie-Françoise Ardant, Estelle Marion, Annick Chauty, Laurent Marsollier and 2 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Trial
  2. Review
  3. The monogenic landscape of human infectious diseases.The Journal of allergy and clinical immunology · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Genetic variants in humanEmerging microbes & infections · 2021
    Article
  9. Linking theOne health (Amsterdam, Netherlands) · 2021
    Review
  10. Article
  11. Review
  12. Human genetics of Buruli ulcer.Human genetics · 2020
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 4 countries.

Jeremy Manry *Laboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale (INSERM) UMR 1163, Paris, France. jeremy.manry@inserm.fr.ORCID http://orcid.org/0000-0001-5998-2051
Quentin B Vincent *Laboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale (INSERM) UMR 1163, Paris, France.
Christian JohnsonFondation Raoul Follereau, Paris, France.
Maya ChrabiehLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale (INSERM) UMR 1163, Paris, France.
Lazaro LorenzoLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale (INSERM) UMR 1163, Paris, France.
Ioannis TheodorouCenter for Immunology and Infectious Diseases, INSERM UMR S 1135, Pierre and Marie Curie University, and AP-HP Laboratoire d'Immunologie et Histocompatibilité Hôpital Saint-Louis, Paris, France.
Marie-Françoise ArdantFondation Raoul Follereau, Paris, France.
Estelle MarionINSERM UMR-U892 and CNRS U6299, team 7, Angers University, Angers University Hospital, Angers, France.ORCID http://orcid.org/0000-0003-4917-9665
Annick ChautyFondation Raoul Follereau, Paris, France.
Laurent MarsollierINSERM UMR-U892 and CNRS U6299, team 7, Angers University, Angers University Hospital, Angers, France.
Laurent AbelLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale (INSERM) UMR 1163, Paris, France.
Alexandre AlcaïsLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale (INSERM) UMR 1163, Paris, France. alexandre.alcais@inserm.fr.ORCID http://orcid.org/0000-0002-1012-2226
Inserm · FRCentre National de la Recherche Scientifique · FRActions pour l’Environnement et le Développement Durable · BJ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Buruli ulcer, caused by Mycobacterium ulcerans and characterized by devastating necrotizing skin lesions, is the third mycobacterial disease worldwide. The role of host genetics in susceptibility to Buruli ulcer has long been suggested. We conduct the first genome-wide association study of Buruli ulcer on a sample of 1524 well characterized patients and controls from rural Benin. Two-stage analyses identify two variants located within LncRNA genes: rs9814705 in ENSG00000240095.1 (P = 2.85 × 10

Indexed as

Mutation, MissensePolymorphism, Single NucleotideAdolescentAdultAutophagyAutophagy-Related ProteinsBeninBuruli UlcerCase-Control StudiesChildFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHost-Pathogen InteractionsHumansMaleATG16L1 protein, humanAutophagy-Related ProteinsRNA, Long Noncoding

Identifiers

PMID32313116
PMCPMC7171125
OpenAlexW3016507776

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.