Evidence map›Paper›PMID 32312822›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Loss of the neural-specific BAF subunit ACTL6B relieves repression of early response genes and causes recessive autism.

Wendy Wenderski, Lu Wang, Andrey Krokhotin, Jessica J Walsh, Hongjie Li, Hirotaka Shoji, Shereen Ghosh, Renee D George, Erik L Miller, Laura Elias and 19 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 66 citations in OpenAlex.

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  6. CRISPR-engineered deletion ofbioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Clinical and genetic delineation of autosomal recessive and dominant ACTL6B-related developmental brain disorders.Genetics in medicine : official journal of the American College of Medical Genetics · 2025
    Article
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  18. Review
  19. Critical periods and Autism Spectrum Disorders, a role for sleep.Neurobiology of sleep and circadian rhythms · 2023
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 6 institutions in 3 countries.

Wendy WenderskiDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Lu WangDepartment of Neuroscience, University of California San Diego, La Jolla, CA 92037.
Andrey KrokhotinDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Jessica J WalshNancy Pritztker Laboratory, Department of Psychiatry and Behavioral Sciences, Stanford Medical School, Palo Alto, CA 94305.
Hongjie LiHoward Hughes Medical Institute, Stanford University, Palo Alto, CA 94305.
Hirotaka ShojiDivision of Systems Medical Science, Institute for Comprehensive Medical Science, Fujita Health University, 470-1192 Toyoake, Aichi, Japan.ORCID 0000-0003-4843-6949
Shereen GhoshDepartment of Neuroscience, University of California San Diego, La Jolla, CA 92037.
Renee D GeorgeDepartment of Neuroscience, University of California San Diego, La Jolla, CA 92037.
Erik L MillerDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Laura EliasDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Mark A GillespieInstitute for Systems Biology, Seattle, WA 98109.
Esther Y SonDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Brett T StaahlDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Seung Tae BaekDepartment of Neuroscience, University of California San Diego, La Jolla, CA 92037.
Valentina StanleyDepartment of Neuroscience, University of California San Diego, La Jolla, CA 92037.
Cynthia MoncadaDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Zohar ShiponyDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305.
Sara B LinkerLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, CA 92037.
Maria C N MarchettoLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, CA 92037.
Fred H GageLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, CA 92037.ORCID 0000-0002-0938-4106
Dillon ChenDepartment of Neuroscience, University of California San Diego, La Jolla, CA 92037.
Tipu SultanDepartment of Pediatric Neurology, Institute of Child Health, Children Hospital Lahore, 54000 Lahore, Pakistan.
Maha S ZakiClinical Genetics Department, Human Genetics and Genome Research Division, National Research Centre, 12311 Cairo, Egypt.
Jeffrey A RanishInstitute for Systems Biology, Seattle, WA 98109.
Tsuyoshi MiyakawaDivision of Systems Medical Science, Institute for Comprehensive Medical Science, Fujita Health University, 470-1192 Toyoake, Aichi, Japan.ORCID 0000-0003-0137-8200
Liqun LuoHoward Hughes Medical Institute, Stanford University, Palo Alto, CA 94305.ORCID 0000-0001-5467-9264
Robert C MalenkaNancy Pritztker Laboratory, Department of Psychiatry and Behavioral Sciences, Stanford Medical School, Palo Alto, CA 94305.
Gerald R CrabtreeDepartment of Pathology, Stanford Medical School, Palo Alto, CA 94305; crabtree@stanford.edu jogleeson@ucsd.edu.
Joseph G GleesonDepartment of Neuroscience, University of California San Diego, La Jolla, CA 92037; crabtree@stanford.edu jogleeson@ucsd.edu.ORCID 0000-0002-0889-9220
Howard Hughes Medical Institute · USChildren’s Institute · USSalk Institute for Biological Studies · USFujita Health University · JPInstitute for Systems Biology · USNational Research Centre · EG

Funding

Large Scale Sequencing and Analysis of GenomesU54HG003067 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY, LANDER, ERIC S · 2004 to 2015
$568.6M
Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Training CoreP50DA042012 · NIDA · STANFORD UNIVERSITY · PI Karl A. Deisseroth, Lisa Giocomo · 2017 to 2026
$27.1M
GENETICS TRAINING PROGRAM FOR PHD CANDIDATEST32GM007790 · NIGMS · STANFORD UNIVERSITY · PI BRUNET, ANNE, KINGSLEY, DAVID M · 1985 to 2020
$12.8M
Yale Center for Mendelian DisordersU54HG006504 · NHGRI · YALE UNIVERSITY · PI GERSTEIN, MARK BENDER, GUNEL, MURAT · 2012 to 2015
$11.0M
Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Molecular Characterization of Joubert SyndromeR01NS048453 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G · 2004 to 2020
$6.0M
ATP-Dependent Chromatin Remodeling in Human MalignancyR01CA163915 · NCI · STANFORD UNIVERSITY · PI Gerald R. Crabtree · 2012 to 2026
$5.4M
Signaling by Calcineurin and NFAT in Axonal OutgrowthR01NS046789 · NINDS · STANFORD UNIVERSITY · PI CRABTREE, GERALD R. · 2003 to 2012
$3.4M
ATP-Dependent Chromatin Regulation in Neurodevelopment and Human DiseaseR37NS046789 · NINDS · STANFORD UNIVERSITY · PI CRABTREE, GERALD R. · 2013 to 2019
$2.7M
UC San Diego Genetics Training ProgramT32GM145427 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRUCE A HAMILTON · 2022 to 2026
$2.6M
Systems level investigation of di-synaptic circuit involved in panic disorderF32MH103949 · NIMH · STANFORD UNIVERSITY · PI WALSH, JESSICA JILLIAN · 2014 to 2016
$126k
Howard Hughes Medical InstituteNCATS NIH HHS UL1 TR001863NCI NIH HHS R01 CA163915NHGRI NIH HHS U54 HG003067NHGRI NIH HHS U54 HG006504NIDA NIH HHS P50 DA042012NIGMS NIH HHS T32 GM007790NIGMS NIH HHS T32 GM008666NIGMS NIH HHS T32 GM145427NIMH NIH HHS F31 MH116588NIMH NIH HHS F32 MH103949NINDS NIH HHS F99 NS118735NINDS NIH HHS R01 NS046789NINDS NIH HHS R01 NS048453NINDS NIH HHS R37 NS046789
6 · The paper itself

Abstract

Synaptic activity in neurons leads to the rapid activation of genes involved in mammalian behavior. ATP-dependent chromatin remodelers such as the BAF complex contribute to these responses and are generally thought to activate transcription. However, the mechanisms keeping such "early activation" genes silent have been a mystery. In the course of investigating Mendelian recessive autism, we identified six families with segregating loss-of-function mutations in the neuronal BAF (nBAF) subunit

Indexed as

ActinsAdenosine TriphosphateAnimalsAutism Spectrum DisorderBehavior, AnimalChromatinChromatin Assembly and DisassemblyChromosomal Proteins, Non-HistoneChromosome PairingCorpus CallosumDendritesDisease Models, AnimalDNA-Binding ProteinsGene Expression RegulationHippocampusHumansActinsActl6b protein, mouseAdenosine TriphosphateChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsTranscription Factorsactivity dependentautismBAFmouse modelrecessive

Identifiers

PMID32312822
PMCPMC7211998
OpenAlexW3016965293

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.