Evidence map›Paper›PMID 32311316›Full record

ArticleBiophysical journal2020

Amyloid Evolution: Antiparallel Replaced by Parallel.

Ali Asghar Hakami Zanjani, Nicholas P Reynolds, Afang Zhang, Tanja Schilling, Raffaele Mezzenga, Joshua T Berryman

Abstract read
In one paragraph

Article in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ali Asghar Hakami ZanjaniDepartment of Physics and Materials Science, University of Luxembourg, Luxembourg City, Luxembourg.
Nicholas P ReynoldsARC Training Centre for Biodevices, Swinburne University of Technology, Melbourne, Victoria, Australia; La Trobe Institute for Molecular Science, Department of Chemistry & Physics, La Trobe University, Bundoora, VIC 3086, Australia.
Afang ZhangDepartment of Polymer Materials, Shanghai University, Shanghai, China.
Tanja SchillingInstitute of Physics, University of Freiburg, Freiburg im Breisgau, Germany.
Raffaele MezzengaDepartments of Materials; Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.
Joshua T BerrymanDepartment of Physics and Materials Science, University of Luxembourg, Luxembourg City, Luxembourg. Electronic address: josh.berryman@uni.lu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several atomic structures have now been found for micrometer-scale amyloid fibrils or elongated microcrystals using a range of methods, including NMR, electron microscopy, and X-ray crystallography, with parallel β-sheet appearing as the most common secondary structure. The etiology of amyloid disease, however, indicates nanometer-scale assemblies of only tens of peptides as significant agents of cytotoxicity and contagion. By combining solution X-ray with molecular dynamics, we show that antiparallel structure dominates at the first stages of aggregation for a specific set of peptides, being replaced by parallel at large length scales only. This divergence in structure between small and large amyloid aggregates should inform future design of molecular therapeutics against nucleation or intercellular transmission of amyloid. Calculations and an overview from the literature argue that antiparallel order should be the first appearance of structure in many or most amyloid aggregation processes, regardless of the endpoint. Exceptions to this finding should exist, depending inevitably on the sequence and on solution conditions.

Indexed as

AmyloidAmyloid beta-PeptidesCrystallography, X-RayMagnetic Resonance SpectroscopyProtein Structure, SecondaryAmyloidAmyloid beta-Peptides

Identifiers

PMID32311316
PMCPMC7231890

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.