Evidence map›Paper›PMID 32310236›Full record

ArticleJournal of visualized experiments : JoVE2020

Visualization and Analysis of Pharyngeal Arch Arteries using Whole-mount Immunohistochemistry and 3D Reconstruction.

AnnJosette Ramirez, Sophie Astrof

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

AnnJosette RamirezDepartment of Cell Biology and Molecular Medicine, New Jersey Medical School, Rutgers Biomedical and Health Sciences; Multidisciplinary PhD Program in Biomedical Sciences: Cell Biology, Neuroscience and Physiology Track, New Jersey Medical School, Rutgers Biomedical and Health Sciences.
Sophie AstrofDepartment of Cell Biology and Molecular Medicine, New Jersey Medical School, Rutgers Biomedical and Health Sciences; sophie.astrof@rutgers.edu.
Rutgers Health

Funding

Role of integrin a5 in the development of aortic arch arteries.R01HL103920 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI ASTROF, SOPHIE · 2010 to 2024
$5.7M
Training in Tissue Engineering and Regenerative MedicineT32AR052273 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI SHAPIRO, IRVING M · 2006 to 2020
$3.3M
Role of fibronectin in the morphogenesis of the cardiac outflow tractR01HL134935 · NHLBI · THOMAS JEFFERSON UNIVERSITY · PI Sophie Astrof · 2017 to 2026
$2.2M
Identification of compensatory mechanisms to rescue aortic arch artery defectsR01HL158049 · NHLBI · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI ASTROF, SOPHIE · 2022 to 2025
$1.9M
Generation of novel Fn1-fluorescent fusion proteins in vivo for the investigation of cell_ECM dynamics in real time.R21OD025323 · OD · THOMAS JEFFERSON UNIVERSITY · PI ASTROF, SOPHIE · 2018 to 2019
$433k
Investigating the requirement and regulation of vascular progenitors derived from the Second Heart Field in Pharyngeal Arch Artery developmentF31HL150949 · NHLBI · RBHS-NEW JERSEY MEDICAL SCHOOL · PI RAMIREZ, ANNJOSETTE · 2020 to 2022
$121k
NHLBI NIH HHS F31 HL150949NHLBI NIH HHS R01 HL103920NHLBI NIH HHS R01 HL134935NHLBI NIH HHS R01 HL158049NIAMS NIH HHS T32 AR052273NIH HHS R21 OD025323
6 · The paper itself

Abstract

Improper formation or remodeling of the pharyngeal arch arteries (PAAs) 3, 4, and 6 contribute to some of the most severe forms of congenital heart disease. To study the formation of PAAs, we developed a protocol using whole-mount immunofluorescence coupled with benzyl alcohol/benzyl benzoate (BABB) tissue clearing, and confocal microscopy. This allows for the visualization of the pharyngeal arch endothelium at a fine cellular resolution as well as the 3D connectivity of the vasculature. Using software, we have established a protocol to quantify the number of endothelial cells (ECs) in PAAs, as well as the number of ECs within the vascular plexus surrounding the PAAs within pharyngeal arches 3, 4, and 6. When applied to the whole embryo, this methodology provides a comprehensive visualization and quantitative analysis of embryonic vasculature.

Indexed as

AnimalsArteriesBranchial RegionEmbryo, MammalianEndothelium, VascularHeart Defects, CongenitalHumansImaging, Three-DimensionalImmunohistochemistryMicroscopy, ConfocalPharynx

Identifiers

PMID32310236
PMCPMC7216781
OpenAlexW3014202374

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.