Evidence map›Paper›PMID 32308193›Full record

ArticleEmerging infectious diseases2020

Biphasic Outbreak of Invasive Group A Streptococcus Disease in Eldercare Facility, New Zealand.

Kate A Worthing, Anja Werno, Ramon Pink, Liam McIntyre, Glen P Carter, Deborah A Williamson, Mark R Davies

Abstract read
In one paragraph

Article in Emerging infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. A worldwide population ofThe Lancet regional health. Western Pacific · 2024
    Article
  2. Article
  3. Review
  4. Review
  5. A Review ofPathogens (Basel, Switzerland) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kate A Worthing
Anja Werno
Ramon Pink
Liam McIntyre
Glen P Carter
Deborah A Williamson
Mark R Davies

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A 3-month outbreak of invasive group A Streptococcus disease at an eldercare facility, in which 5 persons died, was biphasic. Although targeted chemoprophylaxis contained the initial outbreak, a second phase of the outbreak occurred after infection control processes ended. To retrospectively investigate the genomic epidemiology of the biphasic outbreak, we used whole-genome sequencing and multiple bioinformatics approaches. Analysis of isolates from the outbreak and isolates prospectively collected during the outbreak response indicated a single S. pyogenes emm81 clone among residents and staff members. Outbreak isolates differed from nonoutbreak emm81 isolates by harboring an integrative conjugative genomic element that contained the macrolide resistance determinant erm(TR). This study shows how retrospective high-resolution genomic investigations identified rapid spread of a closed-facilty clonal outbreak that was controlled, but not readily cleared, by infection control management procedures.

Indexed as

Anti-Bacterial AgentsStreptococcal InfectionsDisease OutbreaksDrug Resistance, BacterialHumansMacrolidesNew ZealandRetrospective StudiesStreptococcus pyogenesAnti-Bacterial AgentsMacrolidesantimicrobial resistancebacteriaGASgenomic epidemiologygroup A Streptococcusintegrative conjugative elementinvasive disease outbreakmacrolide resistanceNew Zealandoutbreak managementstreptococciStreptococcus pyogenes

Identifiers

PMID32308193
PMCPMC7181915

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.