Evidence map›Paper›PMID 32307927›Full record

ArticleBrain and behavior2020

Optimizing data processing to improve the reproducibility of single-subject functional magnetic resonance imaging.

David A Soltysik

Open access · goldAbstract read
In one paragraph

Article in Brain and behavior, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

David A SoltysikDivision of Biomedical Physics, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, Office of Medical Products and Tobacco, U.S. Food and Drug Administration, Silver Spring, MD, USA.ORCID 0000-0002-6597-5226
United States Food and Drug Administration · US

Funding

U.S. Food and Drug Administration
6 · The paper itself

Abstract

introductionHigh reproducibility is critical for ensuring the confidence needed to use functional magnetic resonance imaging (fMRI) activation maps for presurgical planning.

methodsIn this study, the comparison of different motion correction methods, spatial smoothing methods, regression methods, and thresholding methods was performed to see whether specific data processing methods can be employed to improve the reproducibility of single-subject fMRI activation. Three test-retest metrics were used: the percent difference in activation volume (PDAV), the difference in the center of mass (DCM), and the Dice Similarity Coefficient (DSC).

resultsThe PDAV was minimized when using little or no spatial smoothing and AMPLE thresholding. The DCM was minimized when using affine motion correction and little or no spatial smoothing. The DSC was improved when using affine motion correction and generous spatial smoothing. However, it is believed that the overlap metric may be unsuitable for testing fMRI reproducibility.

conclusionProcessing methods to improve fMRI reproducibility were determined. Importantly, the processing methods needed to improve reproducibility were dependent on the fMRI activation metric of interest.

Indexed as

BrainImage Processing, Computer-AssistedBrain MappingMagnetic Resonance ImagingMental ProcessesReproducibility of Resultsfunctional magnetic resonance imagingmotion correctionreproducibilityspatial smoothing

Identifiers

PMID32307927
PMCPMC7303387
OpenAlexW3017097824

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.