Evidence map›Paper›PMID 32306993›Full record

ArticleParasites & vectors2020

Impact of intestinal parasites on microbiota and cobalamin gene sequences: a pilot study.

Rojelio Mejia, Ashish Damania, Rebecca Jeun, Patricia E Bryan, Paola Vargas, Marisa Juarez, Pamela S Cajal, Julio Nasser, Alejandro Krolewiecki, Emilie Lefoulon and 4 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Rojelio MejiaNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX, USA. rmejia@bcm.edu.ORCID http://orcid.org/0000-0003-4134-4558
Ashish DamaniaNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX, USA.
Rebecca JeunNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX, USA.
Patricia E BryanNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX, USA.
Paola VargasUniversidad Nacional de Salta, Salta, Argentina.
Marisa JuarezUniversidad Nacional de Salta, Salta, Argentina.
Pamela S CajalUniversidad Nacional de Salta, Salta, Argentina.
Julio NasserUniversidad Nacional de Salta, Salta, Argentina.
Alejandro KrolewieckiUniversidad Nacional de Salta, Salta, Argentina.
Emilie LefoulonNew England Biolabs, Inc, Ipswich, MA, USA.
Courtney LongNew England Biolabs, Inc, Ipswich, MA, USA.
Evan DrakeNew England Biolabs, Inc, Ipswich, MA, USA.
Rubén O CiminoUniversidad Nacional de Salta, Salta, Argentina.
Barton SlatkoNew England Biolabs, Inc, Ipswich, MA, USA.
National University of Salta · ARNew England Biolabs (United States) · USBaylor College of Medicine · US

Funding

HRSA HHS D34HP31024
6 · The paper itself

Abstract

backgroundApproximately 30% of children worldwide are infected with gastrointestinal parasites. Depending on the species, parasites can disrupt intestinal bacterial microbiota affecting essential vitamin biosynthesis.

methodsStool samples were collected from 37 asymptomatic children from a previous cross-sectional Argentinian study. A multi-parallel real-time quantitative PCR was implemented for Ascaris lumbricoides, Ancylostoma duodenale, Necator americanus, Strongyloides stercoralis, Trichuris trichiura, Cryptosporidium spp., Entamoeba histolytica and Giardia duodenalis. In addition, whole-genome sequencing analysis was conducted for bacterial microbiota on all samples and analyzed using Livermore Metagenomic Analysis Toolkit and DIAMOND software. Separate analyses were carried out for uninfected, Giardia-only, Giardia + helminth co-infections, and helminth-only groups.

resultsFor Giardia-only infected children compared to uninfected children, DNA sequencing data showed a decrease in microbiota biodiversity that correlated with increasing Giardia burden and was statistically significant using Shannon's alpha diversity (Giardia-only > 1 fg/µl 2.346; non-infected group 3.253, P = 0.0317). An increase in diversity was observed for helminth-only infections with a decrease in diversity for Giardia + helminth co-infections (P = 0.00178). In Giardia-only infections, microbiome taxonomy changed from Firmicutes towards increasing proportions of Prevotella, with the degree of change related to the intensity of infection compared to uninfected (P = 0.0317). The abundance of Prevotella bacteria was decreased in the helminths-only group but increased for Giardia + helminth co-infections (P = 0.0262). Metagenomic analysis determined cobalamin synthesis was decreased in the Giardia > 1 fg/µl group compared to both the Giardia < 1 fg/µl and the uninfected group (P = 0.0369). Giardia + helminth group also had a decrease in cobalamin CbiM genes from helminth-only infections (P = 0.000754).

conclusionThe study results may provide evidence for an effect of parasitic infections enabling the permissive growth of anaerobic bacteria such as Prevotella, suggesting an altered capacity of vitamin B12 (cobalamin) biosynthesis and potential impact on growth and development in children .

Indexed as

CoinfectionIntestinesAnimalsChildChild, PreschoolCross-Sectional StudiesDNA, HelminthDNA, ProtozoanFemaleGastrointestinal MicrobiomeGenes, BacterialGiardia lambliaHelminthsHumansMaleMetagenomicsDNA, HelminthDNA, ProtozoanVitamin B 12CobalaminGiardia duodenalisHelminthsMicrobiome

Identifiers

PMID32306993
PMCPMC7168842
OpenAlexW3016607936

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.