Evidence map›Paper›PMID 32306964›Full record

ArticleBMC medical informatics and decision making2020

Efficient identification of patients eligible for clinical studies using case-based reasoning on Scottish Health Research register (SHARE).

Wen Shi, Tom Kelsey, Frank Sullivan

Abstract read
In one paragraph

Article in BMC medical informatics and decision making, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Clinical Information Retrieval: A Literature Review.Journal of healthcare informatics research · 2024
    Article
4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Wen ShiSchool of Medicine, University of St. Andrews, North Haugh, St. Andrews, Scotland, KY16 9TF, UK.
Tom KelseySchool of Computer Science, University of St. Andrews, North Haugh, St. Andrews, Scotland, KY16 9SX, UK. twk@st-andrews.ac.uk.ORCID 0000-0002-8091-1458
Frank SullivanSchool of Medicine, University of St. Andrews, North Haugh, St. Andrews, Scotland, KY16 9TF, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTrials often struggle to achieve their target sample size with only half doing so. Some researchers have turned to Electronic Health Records (EHRs), seeking a more efficient way of recruitment. The Scottish Health Research Register (SHARE) obtained patients' consent for their EHRs to be used as a searching base from which researchers can find potential participants. However, due to the fact that EHR data is not complete, sufficient or accurate, a database search strategy may not generate the best case-finding result. The current study aims to evaluate the performance of a case-based reasoning method in identifying participants for population-based clinical studies recruiting through SHARE, and assess the difference between its resultant cohort and the original one deriving from searching EHRs.

methodsA case-based reasoning framework was applied to 119 participants in nine projects using two-fold cross-validation, with records from a further 86,292 individuals used for testing. A prediction score for study participation was derived from the diagnosis, procedure, pharmaceutical prescription, and laboratory test results attributes of each participant. Evaluation was conducted by calculating Area Under the ROC Curve and information retrieval metrics for the ranking list of the test set by prediction score. We compared the most likely participants as identified by searching a database to those ranked highest by our model.

resultsThe average ROCAUC for nine projects was 81% indicating strong predictive ability for these data. However, the derived ranking lists showed lower predictive performance, with only 21% of the persons ranked within top 50 positions being the same as identified by searching databases.

conclusionsCase-based reasoning is may be more effective than a database search strategy for participant identification for clinical studies using population EHRs. The lower performance of ranking lists derived from case-based reasoning means that patients identified as highly suitable for study participation may still not be recruited. This suggests that further study is needed into improvements in the collection and curation of population EHRs, such as use of free text data to aid reliable identification of people more likely to be recruited to clinical trials.

Indexed as

HealthElectronic Health RecordsHumansInformation Storage and RetrievalPatientsScotlandArtificial intelligenceClinical studiesElectronic health recordMachine learning

Identifiers

PMID32306964
PMCPMC7169032

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.