Evidence map›Paper›PMID 32306896›Full record

ArticleBMC genomics2020

Protein changes as robust signatures of fish chronic stress: a proteomics approach to fish welfare research.

Cláudia Raposo de Magalhães, Denise Schrama, Ana Paula Farinha, Dominique Revets, Annette Kuehn, Sébastien Planchon, Pedro Miguel Rodrigues, Marco Cerqueira

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
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  3. Review
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  6. Review
  7. Editorial: Fish Welfare in Aquaculture and Research-Where Are We Going?Animals : an open access journal from MDPI · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Development of Welfare Protocols at Slaughter in Farmed Fish.Animals : an open access journal from MDPI · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Cláudia Raposo de MagalhãesCentre of Marine Sciences, CCMAR, Universidade do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Denise SchramaCentre of Marine Sciences, CCMAR, Universidade do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Ana Paula FarinhaCentre of Marine Sciences, CCMAR, Universidade do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Dominique RevetsLuxembourg Institute of Health, Department of Infection and Immunity, 29, rue Henri Koch, L-4354, Esch-sur-Alzette, Luxembourg.
Annette KuehnLuxembourg Institute of Health, Department of Infection and Immunity, 29, rue Henri Koch, L-4354, Esch-sur-Alzette, Luxembourg.
Sébastien PlanchonLuxembourg Institute of Science and Technology, Environmental Research and Innovation (ERIN) Department, 5, avenue des Hauts-Fourneaux, L-4362, Esch-sur-Alzette, Luxembourg.
Pedro Miguel RodriguesCentre of Marine Sciences, CCMAR, Universidade do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal.
Marco CerqueiraCentre of Marine Sciences, CCMAR, Universidade do Algarve, Campus de Gambelas, Edifício 7, 8005-139, Faro, Portugal. macerqueira@ualg.pt.ORCID http://orcid.org/0000-0001-7237-5053
University of Algarve · PTLuxembourg Institute of Health · LULuxembourg Institute of Science and Technology · LU

Funding

Fundação para a Ciência e a Tecnologia SFRH/bd/136319/2018Fundação para a Ciência e a Tecnologia SFRH/BD/138884/2018Fundação para a Ciência e a Tecnologia UIBD/04326/2020Portugal 2020 16-02-05-FMP-12
6 · The paper itself

Abstract

backgroundAquaculture is a fast-growing industry and therefore welfare and environmental impact have become of utmost importance. Preventing stress associated to common aquaculture practices and optimizing the fish stress response by quantification of the stress level, are important steps towards the improvement of welfare standards. Stress is characterized by a cascade of physiological responses that, in-turn, induce further changes at the whole-animal level. These can either increase fitness or impair welfare. Nevertheless, monitorization of this dynamic process has, up until now, relied on indicators that are only a snapshot of the stress level experienced. Promising technological tools, such as proteomics, allow an unbiased approach for the discovery of potential biomarkers for stress monitoring. Within this scope, using Gilthead seabream (Sparus aurata) as a model, three chronic stress conditions, namely overcrowding, handling and hypoxia, were employed to evaluate the potential of the fish protein-based adaptations as reliable signatures of chronic stress, in contrast with the commonly used hormonal and metabolic indicators.

resultsA broad spectrum of biological variation regarding cortisol and glucose levels was observed, the values of which rose higher in net-handled fish. In this sense, a potential pattern of stressor-specificity was clear, as the level of response varied markedly between a persistent (crowding) and a repetitive stressor (handling). Gel-based proteomics analysis of the plasma proteome also revealed that net-handled fish had the highest number of differential proteins, compared to the other trials. Mass spectrometric analysis, followed by gene ontology enrichment and protein-protein interaction analyses, characterized those as humoral components of the innate immune system and key elements of the response to stimulus.

conclusionsOverall, this study represents the first screening of more reliable signatures of physiological adaptation to chronic stress in fish, allowing the future development of novel biomarker models to monitor fish welfare.

Indexed as

Animal WelfareEnvironmental BiomarkersStress, PhysiologicalAnimalsAquacultureCrowdingFish ProteinsHydrocortisoneProteomeProteomicsSea BreamEnvironmental BiomarkersFish ProteinsHydrocortisoneProteomeAquacultureBiomarkersCortisolGlucoseMass-spectrometryProteome

Identifiers

PMID32306896
PMCPMC7168993
OpenAlexW3017062313

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.