Evidence map›Paper›PMID 32303746›Full record

ArticleThe Journal of cell biology2020

Noncanonical regulation of phosphatidylserine metabolism by a Sec14-like protein and a lipid kinase.

Yaxi Wang, Peihua Yuan, Aby Grabon, Ashutosh Tripathi, Dongju Lee, Martin Rodriguez, Max Lönnfors, Michal Eisenberg-Bord, Zehua Wang, Sin Man Lam and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Yaxi WangDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX.
Peihua YuanDepartment of Molecular & Cellular Medicine, Texas A&M Health Science Center, College Station, TX.
Aby GrabonDepartment of Molecular & Cellular Medicine, Texas A&M Health Science Center, College Station, TX.
Ashutosh TripathiDepartment of Molecular & Cellular Medicine, Texas A&M Health Science Center, College Station, TX.
Dongju LeeDepartment of Molecular & Cellular Medicine, Texas A&M Health Science Center, College Station, TX.
Martin RodriguezDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX.
Max LönnforsDepartment of Molecular & Cellular Medicine, Texas A&M Health Science Center, College Station, TX.
Michal Eisenberg-BordDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Zehua WangUniversity of Chinese Academy of Sciences, Beijing, China.
Sin Man LamState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Maya SchuldinerDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Vytas A BankaitisDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX.
Texas A&M Health Science Center · USChinese Academy of Sciences · CNWeizmann Institute of Science · ILTexas A&M University · US

Funding

The Biology and Biochemistry of Lipid Transfer Protein-Regulated Phosphoinositide SignalingR35GM131804 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI Vytas A Bankaitis · 2019 to 2026
$4.5M
NIGMS NIH HHS R35 GM131804
6 · The paper itself

Abstract

The yeast phosphatidylserine (PtdSer) decarboxylase Psd2 is proposed to engage in a membrane contact site (MCS) for PtdSer decarboxylation to phosphatidylethanolamine (PtdEtn). This proposed MCS harbors Psd2, the Sec14-like phosphatidylinositol transfer protein (PITP) Sfh4, the Stt4 phosphatidylinositol (PtdIns) 4-OH kinase, the Scs2 tether, and an uncharacterized protein. We report that, of these components, only Sfh4 and Stt4 regulate Psd2 activity in vivo. They do so via distinct mechanisms. Sfh4 operates via a mechanism for which its PtdIns-transfer activity is dispensable but requires an Sfh4-Psd2 physical interaction. The other requires Stt4-mediated production of PtdIns-4-phosphate (PtdIns4P), where Stt4 (along with the Sac1 PtdIns4P phosphatase and endoplasmic reticulum-plasma membrane tethers) indirectly modulate Psd2 activity via a PtdIns4P homeostatic mechanism that influences PtdSer accessibility to Psd2. These results identify an example in which the biological function of a Sec14-like PITP is cleanly uncoupled from its canonical in vitro PtdIns-transfer activity and challenge popular functional assumptions regarding lipid-transfer protein involvements in MCS function.

Indexed as

1-Phosphatidylinositol 4-KinaseBiological TransportLipid MetabolismMembrane ProteinsPhosphatidylethanolaminesPhosphatidylserinesPhospholipid Transfer ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae Proteins1-Phosphatidylinositol 4-KinaseMembrane ProteinsPDR17 protein, S cerevisiaephosphatidylethanolaminePhosphatidylethanolaminesPhosphatidylserinesPhospholipid Transfer ProteinsSaccharomyces cerevisiae ProteinsScs2 protein, S cerevisiaeSEC14 protein, S cerevisiaeSTT4 protein, S cerevisiae

Identifiers

PMID32303746
PMCPMC7199851
OpenAlexW3016357861

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.