Evidence map›Paper›PMID 32303543›Full record

ArticleApplied and environmental microbiology2020

Microbial Ecology of Atlantic Salmon (Salmo salar) Hatcheries: Impacts of the Built Environment on Fish Mucosal Microbiota.

Jeremiah J Minich, Greg D Poore, Khattapan Jantawongsri, Colin Johnston, Kate Bowie, John Bowman, Rob Knight, Barbara Nowak, Eric E Allen

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it, 132 citations in OpenAlex.

  1. A host of issues: pseudoreplication in host-microbiota studies.Applied and environmental microbiology · 2024
    Pooled it
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Gut Microbiota Response in Meagre (Animals : an open access journal from MDPI · 2026
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. DRIVERS OF VARIATION OF THE ZEBRAFISH EGG MICROBIOME.bioRxiv : the preprint server for biology · 2025
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Jeremiah J MinichMarine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA.ORCID 0000-0002-7202-965X
Greg D PooreDepartment of Bioengineering, University of California San Diego, La Jolla, California, USA.ORCID 0000-0002-3443-3715
Khattapan JantawongsriInstitute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia.
Colin JohnstonTassal Operations Pty Ltd., Hobart, Tasmania, Australia.
Kate BowieTassal Operations Pty Ltd., Hobart, Tasmania, Australia.
John BowmanTasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania, Australia.ORCID 0000-0002-4528-9333
Rob KnightCenter for Microbiome Innovation, University of California San Diego, La Jolla, California, USA.ORCID 0000-0002-0975-9019
Barbara NowakInstitute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia B.Nowak@utas.edu.au eallen@ucsd.edu.ORCID 0000-0002-0347-643X
Eric E AllenMarine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA B.Nowak@utas.edu.au eallen@ucsd.edu.ORCID 0000-0002-1229-8794
University of Tasmania · AUScripps Institution of Oceanography · USUniversity of California San Diego · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007198 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C, INSEL, PAUL A · 1985 to 2024
$29.3M
Comprehensive characterization of the cancer microbiome and its immuno-oncology interfaceF30CA243480 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI POORE, GREGORY DERRICK · 2020 to 2021
$73k
NCI NIH HHS F30 CA243480NIGMS NIH HHS T32 GM007198
6 · The paper itself

Abstract

Successful rearing of fish in hatcheries is critical for conservation, recreational fishing, commercial fishing through wild stock enhancements, and aquaculture production. Flowthrough (FT) hatcheries require more water than recirculating aquaculture systems (RAS), which enable up to 99% of their water to be recycled, thus significantly reducing environmental impacts. Here, we evaluated the biological and physical microbiome interactions of three Atlantic salmon hatcheries (RAS

Indexed as

Built EnvironmentFisheriesAnimalsAquacultureBiofilmsGastrointestinal ContentsGillsMicrobiotaMucous MembraneSalmo salarSkinWater Microbiology16Saquaculturebuilt environmentenvironmental microbiologymicrobial ecologymicrobiome

Identifiers

PMID32303543
PMCPMC7267192
OpenAlexW3016979470

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.