Evidence map›Paper›PMID 32302559›Full record

ArticleStem cell reports2020

Cell-Surface Proteomics Identifies Differences in Signaling and Adhesion Protein Expression between Naive and Primed Human Pluripotent Stem Cells.

Katarzyna Wojdyla, Amanda J Collier, Charlene Fabian, Paola S Nisi, Laura Biggins, David Oxley, Peter J Rugg-Gunn

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  5. Intercellular mRNA transfer alters the human pluripotent stem cell state.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Inter-cellular mRNA Transfer Alters Human Pluripotent Stem Cell State.bioRxiv : the preprint server for biology · 2024
    Article
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  18. Membrane Bound Peroxiredoxin-1 Serves as a Biomarker forAntioxidants & redox signaling · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Katarzyna WojdylaEpigenetics Programme, The Babraham Institute, Cambridge, UK; Mass Spectrometry Facility, The Babraham Institute, Cambridge, UK.
Amanda J CollierEpigenetics Programme, The Babraham Institute, Cambridge, UK.
Charlene FabianEpigenetics Programme, The Babraham Institute, Cambridge, UK.
Paola S NisiEpigenetics Programme, The Babraham Institute, Cambridge, UK.
Laura BigginsBioinformatics Group, The Babraham Institute, Cambridge, UK.
David OxleyMass Spectrometry Facility, The Babraham Institute, Cambridge, UK.
Peter J Rugg-GunnEpigenetics Programme, The Babraham Institute, Cambridge, UK; Wellcome-Medical Research Council Cambridge Stem Cell Institute, Cambridge, UK. Electronic address: peter.rugg-gunn@babraham.ac.uk.
Babraham Institute · GBWellcome/MRC Cambridge Stem Cell Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/B/000C0421Biotechnology and Biological Sciences Research Council BBS/E/B/000C0422Medical Research Council MR/J003808/1Medical Research Council MR/N018419/1
6 · The paper itself

Abstract

Naive and primed human pluripotent stem cells (hPSC) provide valuable models to study cellular and molecular developmental processes. The lack of detailed information about cell-surface protein expression in these two pluripotent cell types prevents an understanding of how the cells communicate and interact with their microenvironments. Here, we used plasma membrane profiling to directly measure cell-surface protein expression in naive and primed hPSC. This unbiased approach quantified over 1,700 plasma membrane proteins, including those involved in cell adhesion, signaling, and cell interactions. Notably, multiple cytokine receptors upstream of JAK-STAT signaling were more abundant in naive hPSC. In addition, functional experiments showed that FOLR1 and SUSD2 proteins are highly expressed at the cell surface in naive hPSC but are not required to establish human naive pluripotency. This study provides a comprehensive stem cell proteomic resource that uncovers differences in signaling pathway activity and has identified new markers to define human pluripotent states.

Indexed as

Cell AdhesionSignal TransductionCell Adhesion MoleculesCell LineCell MembraneFolate Receptor 1HumansInduced Pluripotent Stem CellsMembrane GlycoproteinsProteomeReceptors, CytokineCell Adhesion MoleculesFolate Receptor 1FOLR1 protein, humanMembrane GlycoproteinsProteomeReceptors, CytokineSUSD2 protein, humancell statecell-surface markersembryonichumanJAK-STATplasma membranepluripotent stem cellproteomicsreprogramming

Identifiers

PMID32302559
PMCPMC7220956
OpenAlexW3017236938

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.