Evidence map›Paper›PMID 32302302›Full record

ArticlePLoS computational biology2020

Striatal network modeling in Huntington's Disease.

Adam Ponzi, Scott J Barton, Kendra D Bunner, Claudia Rangel-Barajas, Emily S Zhang, Benjamin R Miller, George V Rebec, James Kozloski

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Pathological cell assembly dynamics in a striatal MSN network model.Frontiers in computational neuroscience · 2024
    Article
  3. Article
  4. Ramping activity in the striatum.Frontiers in computational neuroscience · 2022
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Adam PonziIBM Research, Computational Biology Center, Thomas J. Watson Research Laboratories, Yorktown Heights, New York, United States of America.ORCID 0000-0001-8712-5911
Scott J BartonProgram in Neuroscience, Department of Psychological and Brain Sciences, Indiana University, Bloomington, Indiana, United States of America.
Kendra D BunnerProgram in Neuroscience, Department of Psychological and Brain Sciences, Indiana University, Bloomington, Indiana, United States of America.ORCID 0000-0002-3001-0264
Claudia Rangel-BarajasProgram in Neuroscience, Department of Psychological and Brain Sciences, Indiana University, Bloomington, Indiana, United States of America.
Emily S ZhangProgram in Neuroscience, Department of Psychological and Brain Sciences, Indiana University, Bloomington, Indiana, United States of America.ORCID 0000-0003-4188-5063
Benjamin R MillerProgram in Neuroscience, Department of Psychological and Brain Sciences, Indiana University, Bloomington, Indiana, United States of America.
George V RebecProgram in Neuroscience, Department of Psychological and Brain Sciences, Indiana University, Bloomington, Indiana, United States of America.
James KozloskiIBM Research, Computational Biology Center, Thomas J. Watson Research Laboratories, Yorktown Heights, New York, United States of America.ORCID 0000-0003-3420-4688
Indiana University Bloomington · USIBM Research - Thomas J. Watson Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Medium spiny neurons (MSNs) comprise over 90% of cells in the striatum. In vivo MSNs display coherent burst firing cell assembly activity patterns, even though isolated MSNs do not burst fire intrinsically. This activity is important for the learning and execution of action sequences and is characteristically dysregulated in Huntington's Disease (HD). However, how dysregulation is caused by the various neural pathologies affecting MSNs in HD is unknown. Previous modeling work using simple cell models has shown that cell assembly activity patterns can emerge as a result of MSN inhibitory network interactions. Here, by directly estimating MSN network model parameters from single unit spiking data, we show that a network composed of much more physiologically detailed MSNs provides an excellent quantitative fit to wild type (WT) mouse spiking data, but only when network parameters are appropriate for the striatum. We find the WT MSN network is situated in a regime close to a transition from stable to strongly fluctuating network dynamics. This regime facilitates the generation of low-dimensional slowly varying coherent activity patterns and confers high sensitivity to variations in cortical driving. By re-estimating the model on HD spiking data we discover network parameter modifications are consistent across three very different types of HD mutant mouse models (YAC128, Q175, R6/2). In striking agreement with the known pathophysiology we find feedforward excitatory drive is reduced in HD compared to WT mice, while recurrent inhibition also shows phenotype dependency. We show that these modifications shift the HD MSN network to a sub-optimal regime where higher dimensional incoherent rapidly fluctuating activity predominates. Our results provide insight into a diverse range of experimental findings in HD, including cognitive and motor symptoms, and may suggest new avenues for treatment.

Indexed as

AnimalsBrain MappingCorpus StriatumDisease Models, AnimalDisease ProgressionGABAergic NeuronsHomozygoteHumansHuntingtin ProteinHuntington DiseaseMiceMice, TransgenicMutationNeuronsPhenotypeRadiosurgeryHTT protein, humanHuntingtin Protein

Identifiers

PMID32302302
PMCPMC7197869
OpenAlexW3017244087

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.