Evidence map›Paper›PMID 32298987›Full record

ArticleTranslational oncology2020

Microbiome in Intestinal Lavage Fluid May Be A Better Indicator in Evaluating The Risk of Developing Colorectal Cancer Compared with Fecal Samples.

Weitao Shen, Jiayu Sun, Fen Yao, Kaihuang Lin, Yumeng Yuan, Yexi Chen, Hui Han, Zhiyang Li, Juan Zou, Xiaoyang Jiao

Open access · goldAbstract read
In one paragraph

Article in Translational oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Clinical Significance ofCancer management and research · 2022
    Article
  9. Article
  10. The Role of FecalDisease markers · 2021
    Article
  11. Oral and Fecal Microbiota in Lynch Syndrome.Journal of clinical medicine · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Weitao ShenThe second affiliated hospital of Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: 646957018@qq.com.
Jiayu SunDepartment of Cell Biology and Genetics, Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: 18jysun1@stu.edu.cn.
Fen YaoDepartment of Cell Biology and Genetics, Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: fyao@stu.edu.cn.
Kaihuang LinThe second affiliated hospital of Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: linkaihuang@163.com.
Yumeng YuanDepartment of Cell Biology and Genetics, Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: 671421696@qq.com.
Yexi ChenThe second affiliated hospital of Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: chenyexi@vip.sina.com.
Hui HanThe second affiliated hospital of Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: hanhui0571@126.com.
Zhiyang LiThe second affiliated hospital of Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: medyzy@163.com.
Juan ZouThe second affiliated hospital of Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: 15271689450@163.com.
Xiaoyang JiaoDepartment of Cell Biology and Genetics, Shantou University Medical College, Shantou, Guangdong, China 515041. Electronic address: xyjiao@stu.edu.cn.
Shantou University · CNSecond Affiliated Hospital of Shantou University Medical College · CNShantou University Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveIntestinal microbiota plays a vital role in the pathogenesis of colorectal cancer (CRC), which is crucial for assessing the risk and prognosis of CRC. Most studies regarding human gut microbiota mainly based on the feces, but the exact composition of microbiota vary significantly due to fecal composition is easily affected by many factors. We aim to evaluate whether intestinal lavage fluid (IVF) is a better substitution mirroring the gut microbiota.

methodsWe performed 16S rRNA gene analysis on fecal and IVF samples from 30 CRC patients and 25 healthy individuals, comparison in luminal (feces) / mucosal (IVF) adherent bacterial community profiles were analyzed.

resultsThe difference between feces and IVF were observed, including the diversity and abundance of pathogenic bacteria (either in single strain or in co-occurrence pattern). IVF group shared 605 OTUs with the fecal group, but there was 94 OTUs only observed in fecal samples, while 247 OTUs were mainly existing in the IVF group. Among them, 27 vital bacterial species detected in IVF, while 10 critical species detected in fecal samples. The co-occurrence bacteria Fusobacteria Cluster and Proteobacteria Cluster 2 significantly increased in IVF than in control (P < .01), while Firmicutes Cluster 1, Firmicutes Cluster 2 and Proteobacteria Cluster 1 were markedly lower in IVF than in control (P < .001). In CRC feces, Fusobacteria Cluster was higher than in control (P < .05), but Firmicutes Cluster 1 was of substantially less abundance than in control (P < .001). Proteobacteria Cluster 2 was increased dramatically in IVF than in feces (P < .05), Firmicutes Cluster 1 were of substantially less abundance than in feces (P < .05).

conclusionPathogenic microbiota is more abundant in IVF than in feces. Microbiota of IVF may closely be related to the mucosal-associated microbial communities, which benefit from elucidating the relationship of the intestinal microbiota and CRC carcinogenesis.

Identifiers

PMID32298987
PMCPMC7160452
OpenAlexW3015401463

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.