Evidence map›Paper›PMID 32298230›Full record

ArticleeLife2020

RNA promotes phase separation of glycolysis enzymes into yeast G bodies in hypoxia.

Gregory G Fuller, Ting Han, Mallory A Freeberg, James J Moresco, Amirhossein Ghanbari Niaki, Nathan P Roach, John R Yates, Sua Myong, John K Kim

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 109 citations in OpenAlex.

  1. Article
  2. Article
  3. Construction of a COChemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Gregory G FullerDepartment of Biology, Johns Hopkins University, Baltimore, United States.ORCID 0000-0003-2960-0256
Ting HanNational Institute of Biological Sciences, Beijing, China.
Mallory A FreebergDepartment of Biology, Johns Hopkins University, Baltimore, United States.
James J MorescoDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, United States.
Amirhossein Ghanbari NiakiDepartment of Biophysics, Johns Hopkins University, Baltimore, United States.
Nathan P RoachDepartment of Biology, Johns Hopkins University, Baltimore, United States.
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, United States.ORCID 0000-0001-5267-1672
Sua MyongDepartment of Biophysics, Johns Hopkins University, Baltimore, United States.
John K KimDepartment of Biology, Johns Hopkins University, Baltimore, United States.ORCID 0000-0001-9838-3254
Johns Hopkins University · USScripps Research Institute · USNational Institute of Biological Sciences, Beijing · CN

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI YATES III, JOHN R · 2012 to 2021
$20.7M
Molecular Assembly and Disassembly of RNA-Protein Complexes Implicated in ALS/FTDRF1NS113636 · NINDS · JOHNS HOPKINS UNIVERSITY · PI MYONG, SUA · 2019 to 2019
$2.0M
Formation and Function of Glycolytic Bodies in HypoxiaR01GM129301 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KIM, JOHN · 2018 to 2021
$1.9M
NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM129301NINDS NIH HHS 1-RF1-NS113636-01NINDS NIH HHS RF1 NS113636
6 · The paper itself

Abstract

In hypoxic stress conditions, glycolysis enzymes assemble into singular cytoplasmic granules called glycolytic (G) bodies. G body formation in yeast correlates with increased glucose consumption and cell survival. However, the physical properties and organizing principles that define G body formation are unclear. We demonstrate that glycolysis enzymes are non-canonical RNA binding proteins, sharing many common mRNA substrates that are also integral constituents of G bodies. Targeting nonspecific endoribonucleases to G bodies reveals that RNA nucleates G body formation and maintains its structural integrity. Consistent with a phase separation mechanism of biogenesis, recruitment of glycolysis enzymes to G bodies relies on multivalent homotypic and heterotypic interactions. Furthermore, G bodies fuse in vivo and are largely insensitive to 1,6-hexanediol, consistent with a hydrogel-like composition. Taken together, our results elucidate the biophysical nature of G bodies and demonstrate that RNA nucleates phase separation of the glycolysis machinery in response to hypoxic stress.

Indexed as

Cytoplasmic GranulesEndoribonucleasesGlycolysisRNA, FungalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsEndoribonucleasesRNA, FungalSaccharomyces cerevisiae Proteinscell biologyglycolysishypoxiaphase separationRNAS. cerevisiae

Identifiers

PMID32298230
PMCPMC7162659
OpenAlexW3016651277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.