Evidence map›Paper›PMID 32297018›Full record

ArticleAMB Express2020

Exploring the key microbial changes in the rhizosphere that affect the occurrence of tobacco root-knot nematodes.

Kuo Huang, Qipeng Jiang, Liehua Liu, Shuting Zhang, Chaoli Liu, Haitao Chen, Wei Ding, Yongqiang Zhang

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
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  16. Effects of Strigolactone onFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kuo HuangCollege of Plant Protection, Southwest University, Chongqing, 400715, China.
Qipeng JiangCollege of Plant Protection, Southwest University, Chongqing, 400715, China.
Liehua LiuCollege of Plant Protection, Southwest University, Chongqing, 400715, China.
Shuting ZhangCollege of Plant Protection, Southwest University, Chongqing, 400715, China.
Chaoli LiuCollege of Plant Protection, Southwest University, Chongqing, 400715, China.
Haitao ChenChongqing Institute of Tobacco Science, Chongqing, 400715, People's Republic of China.
Wei DingCollege of Plant Protection, Southwest University, Chongqing, 400715, China.
Yongqiang ZhangCollege of Plant Protection, Southwest University, Chongqing, 400715, China. zyqiang@swu.edu.cn.
Southwest University · CNTobacco Research Institute · CN

Funding

a major project for green prevention and control of Chongqing Tobacco corporation NY20180401070011the China National Tobacco Corporation SCYC201704
6 · The paper itself

Abstract

Root-knot nematode (RKN) disease is a soil-borne disease. However, most studies on RKN have focused on the screening of agents and the cultivation of resistant varieties, and reports on the interaction of RKNs with soil microorganisms are few. In this study, we performed Illumina high-throughput sequencing to analyze diseased and healthy soil and the microbial-community changes in rhizosphere soil after microbial treatment (Pseudomonas flurescens, Bacillus subtilis, Paecolomyces lilacinus). Results showed significant differences in the bacterial community richness and diversity between diseased and healthy soil and the presence of different microbial species. After treatment, the richness and diversity of microbial communities in soil, as well as the number and incidence of second-stage juvenile of RKNs, decreased. Through linear discriminant analysis effect size, Pearson correlation, and Venn diagram analysis, we screened five genera that were closely related to disease occurrence, among which Pseudomonas was most related to disease inhibition. Our results suggested that the occurrence of tobacco RKN was related to changes in soil microbial communities, and that the interactions among Pseudomonas, Bryobacter, Variibacter, Coniochaeta, and Metarhizium affected the health of rhizosphere soil.

Indexed as

Microbial communityPseudomonasRoot-knot nematodeSoil-borne disease

Identifiers

PMID32297018
PMCPMC7158972
OpenAlexW3016307324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.