Evidence map›Paper›PMID 32296918›Full record

ArticleCurrent microbiology2020

Characterization of Gut Microbiota in Hospitalized Patients with Clostridioides difficile Infection.

Bahareh Vakili, Abolfazl Fateh, Hamid Asadzadeh Aghdaei, Fattah Sotoodehnejadnematalahi, Seyed Davar Siadat

Abstract read
PubMed Publisher
In one paragraph

Article in Current microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 29 citations in OpenAlex.

  1. Characterization of the Gut Microbiome of Patients withPathogens (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Review
  4. NKp46Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Rational Design of Live Biotherapeutic Products for the Prevention ofbioRxiv : the preprint server for biology · 2024
    Article
  7. Gut Microbiota Composition andGut microbes reports · 2024
    Article
  8. Article
  9. Review
  10. Journal of clinical medicine · 2023
    Review
  11. Article
  12. Characterization of the gut microbiome of patients withFrontiers in cellular and infection microbiology · 2023
    Article
  13. Review
  14. Review
  15. Gut Microbiota Composition Associated withPathogens (Basel, Switzerland) · 2022
    Review
  16. Article
  17. Frontiers in gastroenterology (Lausanne, Switzerland) · 2022
    Review
  18. Article
  19. Gut Dysbiosis andFrontiers in microbiology · 2021
    Review
  20. Probiotic Yeasts andFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Bahareh VakiliDepartment of Biology, School of Basic Science, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Abolfazl FatehDepartment of Mycobacteriology and Pulmonary Research, Pasteur Institute of Iran, Tehran, Iran.
Hamid Asadzadeh AghdaeiBasic and Molecular Epidemiology of Gastrointestinal Disorders Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Fattah SotoodehnejadnematalahiDepartment of Biology, School of Basic Science, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Seyed Davar SiadatDepartment of Mycobacteriology and Pulmonary Research, Pasteur Institute of Iran, Tehran, Iran. siadat2019@gmail.com.
Islamic Azad University, Science and Research Branch · IRPasteur Institute of Iran · IRShahid Beheshti University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clostridioides difficile infection (CDI) is one of the most common causes of nosocomial diarrhea in developed countries and the main cause in healthcare settings. This case-control study was designed to evaluate the composition of the gut microbiota dominant bacterial groups in patients with CDI compared to the healthy control subjects. A total of 100 adult subjects involving 50 inpatients with CDI and 50 healthy persons were enrolled in the study. C. difficile isolates were characterized according to the anaerobic culture and presence of toxin genes with multiplex PCR. An ecological analysis was performed real-time quantitative PCR for bacterial elements. The abundances of Enterococcus spp., Lactobacillus spp., Escherichia coli, C. difficile, and Akkermansia muciniphila were higher in group CDI compared with group HC (P < 0.05). The abundances of Bacteroides spp., Bifidobacterium spp., and Faecalibacterium prausnitzii were lower in group CDI than in group HC (P < 0.05). No significant difference was observed in the copy number of Prevotella genus between the CDI and HC subjects (P-value = 0.087). We observed that economic status and income levels were reduced at patients with CDI, however, there was no significant difference between CDI and HC group results and other variables, such as age, BMI, and educational level. These findings showed a reduction in butyrate-producing bacteria and increase in lactic acid-producing bacteria was seen in CDI status. Overrepresentation of Akkermansia may be a predictive marker for the development of nosocomial diarrhea can result in a worse CDI prognosis.

Indexed as

Gastrointestinal MicrobiomeHospitalizationAdolescentAdultBacteriaButyratesCase-Control StudiesClostridioides difficileClostridium InfectionsDiarrheaEconomic StatusFecesFemaleHumansIranLactic AcidButyratesLactic AcidRNA, Ribosomal, 16S

Identifiers

PMID32296918
OpenAlexW3016835472

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.