Evidence map›Paper›PMID 32295916›Full record

ArticleJournal of virology2020

Innate Intracellular Antiviral Responses Restrict the Amplification of Defective Virus Genomes of Parainfluenza Virus 5.

Elizabeth B Wignall-Fleming, Andri Vasou, Dan Young, John A L Short, David J Hughes, Steve Goodbourn, Richard E Randall

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. A Virus Is a Community: Diversity within Negative-Sense RNA Virus Populations.Microbiology and molecular biology reviews : MMBR · 2022
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Elizabeth B Wignall-FlemingSchool of Biology, Centre for Biomolecular Sciences, University of St. Andrews, St. Andrews, United Kingdom.
Andri VasouSchool of Biology, Centre for Biomolecular Sciences, University of St. Andrews, St. Andrews, United Kingdom.
Dan YoungSchool of Biology, Centre for Biomolecular Sciences, University of St. Andrews, St. Andrews, United Kingdom.
John A L ShortSchool of Biology, Centre for Biomolecular Sciences, University of St. Andrews, St. Andrews, United Kingdom.
David J HughesSchool of Biology, Centre for Biomolecular Sciences, University of St. Andrews, St. Andrews, United Kingdom.ORCID 0000-0002-0090-5710
Steve GoodbournInstitute for Infection and Immunity, St. George's, University of London, London, United Kingdom.
Richard E RandallSchool of Biology, Centre for Biomolecular Sciences, University of St. Andrews, St. Andrews, United Kingdom rer@st-and.ac.uk.ORCID 0000-0002-9304-6678
University of St Andrews · GBSt George's, University of London · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

During the replication of parainfluenza virus 5 (PIV5), copyback defective virus genomes (DVGs) are erroneously produced and are packaged into "infectious" virus particles. Copyback DVGs are the primary inducers of innate intracellular responses, including the interferon (IFN) response. While DVGs can interfere with the replication of nondefective (ND) virus genomes and activate the IFN-induction cascade before ND PIV5 can block the production of IFN, we demonstrate that the converse is also true, i.e., high levels of ND virus can block the ability of DVGs to activate the IFN-induction cascade. By following the replication and amplification of DVGs in A549 cells that are deficient in a variety of innate intracellular antiviral responses, we show that DVGs induce an uncharacterized IFN-independent innate response(s) that limits their replication. High-throughput sequencing was used to characterize the molecular structure of copyback DVGs. While there appears to be no sequence-specific break or rejoining points for the generation of copyback DVGs, our findings suggest there are region, size, and/or structural preferences selected for during for their amplification.

Indexed as

A549 CellsAnimalsBase SequenceCell LineChlorocebus aethiopsCytoplasmDefective VirusesGenome, ViralHigh-Throughput Nucleotide SequencingHumansImmunity, InnateInterferonsParainfluenza Virus 5RNA, ViralVero CellsVirionInterferonsRNA, Viraldefective virus genomeshost cell restrictioninnate immunityparamyxoviruses

Identifiers

PMID32295916
PMCPMC7307174
OpenAlexW3016894382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.