Evidence map›Paper›PMID 32295627›Full record

ArticleParasites & vectors2020

Modelling the monthly abundance of Culicoides biting midges in nine European countries using Random Forests machine learning.

Ana Carolina Cuéllar, Lene Jung Kjær, Andreas Baum, Anders Stockmarr, Henrik Skovgard, Søren Achim Nielsen, Mats Gunnar Andersson, Anders Lindström, Jan Chirico, Renke Lühken and 31 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
8.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 42 citations in OpenAlex.

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  10. VectorNet: collaborative mapping of arthropod disease vectors in Europe and surrounding areas since 2010.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2023
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  11. WebGIS-Based Real-Time Surveillance and Response System for Vector-Borne Infectious Diseases.International journal of environmental research and public health · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 20 institutions in 11 countries.

Ana Carolina CuéllarDivision for Diagnostics and Scientific Advice, National Veterinary Institute, Technical University of Denmark (DTU), Lyngby, Denmark. anacarocuellar@gmail.com.
Lene Jung KjærDivision for Diagnostics and Scientific Advice, National Veterinary Institute, Technical University of Denmark (DTU), Lyngby, Denmark.
Andreas BaumDepartment of Applied Mathematics and Computer Science, Technical University of Denmark (DTU), Lyngby, Denmark.
Anders StockmarrDepartment of Applied Mathematics and Computer Science, Technical University of Denmark (DTU), Lyngby, Denmark.
Henrik SkovgardDepartment of Agroecology - Entomology and Plant Pathology, Aarhus University, Aarhus, Denmark.
Søren Achim NielsenDepartment of Science and Environment, Roskilde University, Roskilde, Denmark.
Mats Gunnar AnderssonNational Veterinary Institute (SVA), Uppsala, Sweden.
Anders LindströmNational Veterinary Institute (SVA), Uppsala, Sweden.
Jan ChiricoNational Veterinary Institute (SVA), Uppsala, Sweden.
Renke LühkenFaculty of Mathematics, Informatics and Natural Sciences, Universität Hamburg, Hamburg, Germany.
Sonja SteinkeDepartment of Biology and Environmental Sciences, Carl von Ossietzky University, Oldenburg, Germany.
Ellen KielDepartment of Biology and Environmental Sciences, Carl von Ossietzky University, Oldenburg, Germany.
Jörn GethmannInstitute of Epidemiology, Friedrich-Loeffler-Institut, Greifswald, Germany.
Franz J ConrathsInstitute of Epidemiology, Friedrich-Loeffler-Institut, Greifswald, Germany.
Magdalena LarskaDepartment of Virology, National Veterinary Research Institute, Pulawy, Poland.
Marcin SmreczakDepartment of Virology, National Veterinary Research Institute, Pulawy, Poland.
Anna OrłowskaDepartment of Virology, National Veterinary Research Institute, Pulawy, Poland.
Inger HamnesNorwegian Veterinary Institute, Oslo, Norway.
Ståle SvilandNorwegian Veterinary Institute, Oslo, Norway.
Petter HoppNorwegian Veterinary Institute, Oslo, Norway.
Katharina BruggerUnit of Veterinary Public Health and Epidemiology, University of Veterinary Medicine, Vienna, Austria.
Franz RubelUnit of Veterinary Public Health and Epidemiology, University of Veterinary Medicine, Vienna, Austria.
Thomas BalenghienCIRAD, UMR ASTRE, 34398, Montpellier, France.
Claire GarrosIAV Hassan II, Unité MIMC, 10 100, Rabat-Instituts, Morocco.
Ignace RakotoarivonyIAV Hassan II, Unité MIMC, 10 100, Rabat-Instituts, Morocco.
Xavier AllèneIAV Hassan II, Unité MIMC, 10 100, Rabat-Instituts, Morocco.
Jonathan LhoirCIRAD, UMR ASTRE, 34398, Montpellier, France.
David ChavernacCIRAD, UMR ASTRE, 34398, Montpellier, France.
Jean-Claude DelécolleInstitute of Parasitology and Tropical Pathology of Strasbourg, UR7292, Université de Strasbourg, Strasbourg, France.
Bruno MathieuInstitute of Parasitology and Tropical Pathology of Strasbourg, UR7292, Université de Strasbourg, Strasbourg, France.
Delphine DelécolleInstitute of Parasitology and Tropical Pathology of Strasbourg, UR7292, Université de Strasbourg, Strasbourg, France.
Marie-Laure Setier-RioEID Méditerranée, Montpellier, France.
Bethsabée ScheidEID Méditerranée, Montpellier, France.
Miguel Ángel Miranda ChuecaApplied Zoology and Animal Conservation Research Group, University of the Balearic Islands, Palma, Spain.
Carlos BarcelóApplied Zoology and Animal Conservation Research Group, University of the Balearic Islands, Palma, Spain.
Javier LucientesDepartment of Animal Pathology, University of Zaragoza, Zaragoza, Spain.
Rosa EstradaDepartment of Animal Pathology, University of Zaragoza, Zaragoza, Spain.
Alexander MathisInstitute of Parasitology, National Centre for Vector Entomology, Vetsuisse FacultyInstitute of Parasitology, National Centre for Vector Entomology, Vetsuisse Faculty, University of Zürich, Zürich, Switzerland.
Roger VenailAvia-GIS NV, Zoersel, Belgium.
Wesley TackMeise Botanic Garden, Meise, Belgium.
Rene BødkerDivision for Diagnostics and Scientific Advice, National Veterinary Institute, Technical University of Denmark (DTU), Lyngby, Denmark.
Technical University of Denmark · DKNational Veterinary Research Institute · PLInstitut Agronomique et Vétérinaire Hassan II · MANorwegian Veterinary Institute · NOSwedish Veterinary Agency · SEAvia-GIS (Belgium) · BECarl von Ossietzky Universität Oldenburg · DECentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRInstitut de Neurobiologie de la Méditerranée · FRInstitut d’Epidémiologie Neurologique et de Neurologie Tropicale · FRUniversidad de Zaragoza · ESUniversitat de les Illes Balears · ESUniversity of Veterinary Medicine Vienna · ATAarhus University · DKAnimal, Santé, Territoires, Risques et Ecosystèmes · FRBernhard Nocht Institute for Tropical Medicine · DEFriedrich-Loeffler-Institut · DERoskilde University · DKUniversité de Strasbourg · FRUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCulicoides biting midges transmit viruses resulting in disease in ruminants and equids such as bluetongue, Schmallenberg disease and African horse sickness. In the past decades, these diseases have led to important economic losses for farmers in Europe. Vector abundance is a key factor in determining the risk of vector-borne disease spread and it is, therefore, important to predict the abundance of Culicoides species involved in the transmission of these pathogens. The objectives of this study were to model and map the monthly abundances of Culicoides in Europe.

methodsWe obtained entomological data from 904 farms in nine European countries (Spain, France, Germany, Switzerland, Austria, Poland, Denmark, Sweden and Norway) from 2007 to 2013. Using environmental and climatic predictors from satellite imagery and the machine learning technique Random Forests, we predicted the monthly average abundance at a 1 km

resultsThe predictive power of the resulting models varied according to month and the Culicoides species/ensembles predicted. Model performance was lower for winter months. Performance was higher for the Obsoletus ensemble, followed by the Pulicaris ensemble, while the model for Culicoides imicola showed a poor performance. Distribution and abundance patterns corresponded well with the known distributions in Europe. The Random Forests model approach was able to distinguish differences in abundance between countries but was not able to predict vector abundance at individual farm level.

conclusionsThe models and maps presented here represent an initial attempt to capture large scale geographical and temporal variations in Culicoides abundance. The models are a first step towards producing abundance inputs for R

Indexed as

CeratopogonidaeMachine LearningPopulation DynamicsAnimalsClimateEcosystemEuropeFarmsInsect VectorsModels, TheoreticalSeasonsCulicoides abundanceCulicoides seasonalityEnvironmental variablesEuropeRandom Forest machine learningSpatial predictions

Identifiers

PMID32295627
PMCPMC7161244
OpenAlexW3017292217

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.