Evidence map›Paper›PMID 32294141›Full record

ArticlePLoS pathogens2020

Cofactor and glycosylation preferences for in vitro prion conversion are predominantly determined by strain conformation.

Cassandra M Burke, Daniel J Walsh, Kenneth M K Mark, Nathan R Deleault, Koren A Nishina, Umberto Agrimi, Michele A Di Bari, Surachai Supattapone

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 37 citations in OpenAlex.

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  10. Multiple aspects of amyloid dynamicsFrontiers in molecular neuroscience · 2024
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  20. What is the role of lipids in prion conversion and disease?Frontiers in molecular neuroscience · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Cassandra M BurkeDepartments of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.
Daniel J WalshDepartments of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.ORCID 0000-0001-8485-6516
Kenneth M K MarkDepartments of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.ORCID 0000-0003-1867-6212
Nathan R DeleaultDepartments of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.
Koren A NishinaDepartments of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.ORCID 0000-0002-1898-9094
Umberto AgrimiDepartment of Veterinary Public Health and Food Safety, Istituto Superiore di Sanità, Rome, Italy.
Michele A Di BariDepartment of Veterinary Public Health and Food Safety, Istituto Superiore di Sanità, Rome, Italy.ORCID 0000-0003-0943-6823
Surachai SupattaponeDepartments of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.ORCID 0000-0001-9060-4550
Dartmouth College · USIstituto Superiore di Sanità · IT

Funding

HOST-MICROBE INTERACTIONST32AI007519 · NIAID · DARTMOUTH COLLEGE · PI DEBORAH A HOGAN · 1997 to 2026
$5.9M
Structural Mechanism of Mammalian Prion InfectivityR01NS118796 · NINDS · DARTMOUTH COLLEGE · PI SUPATTAPONE, SURACHAI, ZILM, KURT WILLIAM · 2020 to 2024
$2.8M
Novel Therapeutic Strategies Targeting Malleability of Wild-Type and Mutant PrionsR01NS117276 · NINDS · DARTMOUTH COLLEGE · PI SUPATTAPONE, SURACHAI · 2020 to 2025
$2.4M
Dissecting the Mechanism of Prion Formation with a Permissive HostR01NS102301 · NINDS · DARTMOUTH COLLEGE · PI SUPATTAPONE, SURACHAI · 2018 to 2021
$2.2M
Structural Mechanism of Mammalian Prion InfectivityR56NS094576 · NINDS · DARTMOUTH COLLEGE · PI SUPATTAPONE, SURACHAI, ZILM, KURT WILLIAM · 2017 to 2017
$567k
Combination Chemotherapy for Treatment of Prion DiseaseR21NS099928 · NINDS · DARTMOUTH COLLEGE · PI SUPATTAPONE, SURACHAI · 2017 to 2018
$446k
NIAID NIH HHS T32 AI007519NINDS NIH HHS R01 NS102301NINDS NIH HHS R01 NS117276NINDS NIH HHS R01 NS118796NINDS NIH HHS R21 NS099928NINDS NIH HHS R56 NS094576
6 · The paper itself

Abstract

Prion diseases are caused by the misfolding of a host-encoded glycoprotein, PrPC, into a pathogenic conformer, PrPSc. Infectious prions can exist as different strains, composed of unique conformations of PrPSc that generate strain-specific biological traits, including distinctive patterns of PrPSc accumulation throughout the brain. Prion strains from different animal species display different cofactor and PrPC glycoform preferences to propagate efficiently in vitro, but it is unknown whether these molecular preferences are specified by the amino acid sequence of PrPC substrate or by the conformation of PrPSc seed. To distinguish between these two possibilities, we used bank vole PrPC to propagate both hamster or mouse prions (which have distinct cofactor and glycosylation preferences) with a single, common substrate. We performed reconstituted sPMCA reactions using either (1) phospholipid or RNA cofactor molecules, or (2) di- or un-glycosylated bank vole PrPC substrate. We found that prion strains from either species are capable of propagating efficiently using bank vole PrPC substrates when reactions contained the same PrPC glycoform or cofactor molecule preferred by the PrPSc seed in its host species. Thus, we conclude that it is the conformation of the input PrPSc seed, not the amino acid sequence of the PrPC substrate, that primarily determines species-specific cofactor and glycosylation preferences. These results support the hypothesis that strain-specific patterns of prion neurotropism are generated by selection of differentially distributed cofactors molecules and/or PrPC glycoforms during prion replication.

Indexed as

Amino Acid SequenceAnimalsArvicolinaeBrainCommunicable DiseasesCricetinaeGlycosylationMesocricetusMiceMice, Inbred C57BLMolecular ConformationPrion DiseasesPrionsPrPC ProteinsPrPSc ProteinsSpecies SpecificityPrionsPrPC ProteinsPrPSc Proteins

Identifiers

PMID32294141
PMCPMC7185723
OpenAlexW3016184482

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.