Evidence map›Paper›PMID 32292653›Full record

ArticlePeerJ2020

A real-time PCR assay to accurately quantify polar bear DNA in fecal extracts.

Kristen M Hayward, Michelle P Harwood, Stephen C Lougheed, Zhengxin Sun, Peter Van Coeverden de Groot, Evelyn L Jensen

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Kristen M Hayward *Department of Biology, Queen's University, Kingston, ON, Canada.ORCID 0000-0002-2466-4587
Michelle P Harwood *Department of Biology, Queen's University, Kingston, ON, Canada.ORCID 0000-0003-4758-3373
Stephen C LougheedDepartment of Biology, Queen's University, Kingston, ON, Canada.
Zhengxin SunDepartment of Biology, Queen's University, Kingston, ON, Canada.
Peter Van Coeverden de GrootDepartment of Biology, Queen's University, Kingston, ON, Canada.
Evelyn L JensenDepartment of Biology, Queen's University, Kingston, ON, Canada.ORCID 0000-0002-1819-3117
Queen's University · CAUniversity of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA extracted from fecal samples contains DNA from the focal species, food, bacteria and pathogens. Most DNA quantification methods measure total DNA and cannot differentiate among sources. Despite the desirability of noninvasive fecal sampling for studying wildlife populations, low amounts of focal species DNA make it difficult to use for next-generation sequencing (NGS), where accurate DNA quantification is critical for normalization. Two factors are required prior to using fecal samples in NGS libraries: (1) an accurate quantification method for the amount of target DNA and (2) a determination of the relative amount of target DNA needed for successful single nucleotide polymorphism genotyping assays. Here, we address these needs by developing primers to amplify a 101 bp region of the nuclear

Indexed as

Noninvasive samplingPopulation geneticsqPCRUrsus maritimus

Identifiers

PMID32292653
PMCPMC7147431
OpenAlexW3015551320

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.