Evidence map›Paper›PMID 32291698›Full record

ArticleCell stress & chaperones2020

Ebola virus glycoprotein GP1-host cell-surface HSPA5 binding site prediction.

Abdo A Elfiky

Open access · bronzeAbstract read
In one paragraph

Article in Cell stress & chaperones, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.5field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  3. Article
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  8. Natural products may interfere with SARS-CoV-2 attachment to the host cell.Journal of biomolecular structure & dynamics · 2021
    Article
  9. Review
  10. COVID-19 and Cell Stress.Advances in experimental medicine and biology · 2021
    Article
  11. Review
  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Abdo A ElfikyBiophysics Department, Faculty of Sciences, Cairo University, Giza, Egypt. abdo@sci.cu.edu.eg.
Cairo University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ebola virus (EBOV) infection is a widespread infection that has created a bad memory in Africa. In the 2014 and 2015 outbreak, more than 28,000 infections were reported by the World Health Organization, with about 11,300 deaths in Guinea, Liberia, and Sierra Leone. Heat shock protein A5 (HSPA5), termed also GRP78, is a host cell chaperone protein responsible for the unfolded protein response in the endoplasmic reticulum. Under stress, HSPA5 is upregulated and becomes cell-surface exposed. Recent studies report the association of cell-surface HSPA5 with EBOV glycoproteins GP1 and GP2. In this study, structural and sequence analysis and molecular docking are used to predict the possible binding site between the cell-surface HSPA5 and EBOV GP1. The results show a promising binding site that supports the hypothesis of HSPA5 selectivity for binding to a specific peptide sequence (pep42). This study paves the way to suggest possible inhibitors to stop viral association with cell-surface receptors and subsequently reduce viral infection.

Indexed as

Binding SitesEndoplasmic Reticulum Chaperone BiPHeat-Shock ProteinsModels, MolecularMolecular Docking SimulationPeptides, CyclicSequence AlignmentViral Envelope ProteinsEndoplasmic Reticulum Chaperone BiPenvelope glycoprotein, Ebola virusHeat-Shock ProteinsPeptides, CyclicViral Envelope ProteinsEbola virus entryEBOV glycoproteinsGRP78HSPA5Protein-protein dockingStructural bioinformatics

Identifiers

PMID32291698
PMCPMC7154572
OpenAlexW3015394586

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.