Evidence map›Paper›PMID 32290261›Full record

ArticleMolecules (Basel, Switzerland)2020

Biophysical Screens Identify Fragments That Bind to the Viral DNA-Binding Proteins EBNA1 and LANA.

Troy E Messick, Lois Tolvinski, Edward R Zartler, Anna Moberg, Åsa Frostell, Garry R Smith, Allen B Reitz, Paul M Lieberman

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. EBNA1 inhibitors have potent and selective antitumor activity in xenograft models of Epstein-Barr virus-associated gastric cancer.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2021
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Troy E MessickThe Wistar Institute, 3601 Spruce Street, Philadelphia, PA 19104, USA.
Lois TolvinskiThe Wistar Institute, 3601 Spruce Street, Philadelphia, PA 19104, USA.
Edward R ZartlerQuantum Tessera Consulting, LLC, Collegeville, PA 19426, USA.
Anna MobergGE Healthcare Bio-Sciences AB, Björkgatan 30, SE-751 84 Uppsala, Sweden.
Åsa FrostellGE Healthcare Bio-Sciences AB, Björkgatan 30, SE-751 84 Uppsala, Sweden.
Garry R SmithFox Chase Chemical Diversity Center, Inc., 3805 Old Easton Road, Doylestown, PA 18902, USA.
Allen B ReitzFox Chase Chemical Diversity Center, Inc., 3805 Old Easton Road, Doylestown, PA 18902, USA.
Paul M LiebermanThe Wistar Institute, 3601 Spruce Street, Philadelphia, PA 19104, USA.
The Wistar Institute · USFox Chase Chemical Diversity Center · USXperi (United States) · US

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Aaron Robert Goldman · 1985 to 2026
$75.9M
Regulation of Epstein-Barr Virus LatencyR01CA093606 · NCI · WISTAR INSTITUTE · PI LIEBERMAN, PAUL M. · 2002 to 2022
$6.7M
Regulation of KSHV LatencyR01CA117830 · NCI · WISTAR INSTITUTE · PI PAUL M. LIEBERMAN · 2006 to 2026
$6.4M
NCI NIH HHS P30 CA010815NCI NIH HHS R01 CA093606NCI NIH HHS R01 CA117830NIH HHS 5R01CA186775Wellcome Trust WT096496/Z/11/Z
6 · The paper itself

Abstract

The human gamma-herpesviruses Epstein-Barr virus (EBV) (HHV-4) and Kaposi's sarcoma-associated herpesvirus (KSHV) (HHV-8) are responsible for a number of diseases, including various types of cancer. Epstein-Barr nuclear antigen 1 (EBNA1) from EBV and latency-associated nuclear antigen (LANA) from KSHV are viral-encoded DNA-binding proteins that are essential for the replication and maintenance of their respective viral genomes during latent, oncogenic infection. As such, EBNA1 and LANA are attractive targets for the development of small-molecule inhibitors. To this end, we performed a biophysical screen of EBNA1 and LANA using a fragment library by saturation transfer difference (STD)-NMR spectroscopy and surface plasmon resonance (SPR). We identified and validated a number of unique fragment hits that bind to EBNA1 or LANA. We also determined the high-resolution crystal structure of one fragment bound to EBNA1. Results from this screening cascade provide new chemical starting points for the further development of potent inhibitors for this class of viral proteins.

Indexed as

Drug DiscoveryAntigens, ViralDNA-Binding ProteinsDNA, ViralEpstein-Barr Virus Nuclear AntigensGammapapillomavirusHerpesvirus 4, HumanHerpesvirus 8, HumanHumansLigandsMagnetic Resonance SpectroscopyModels, MolecularNuclear ProteinsSmall Molecule LibrariesStructure-Activity RelationshipAntigens, ViralDNA-Binding ProteinsDNA, ViralEBV-encoded nuclear antigen 1Epstein-Barr Virus Nuclear Antigenslatency-associated nuclear antigenLigandsNuclear ProteinsSmall Molecule LibrariesEpstein–Barr nuclear antigen 1Epstein–Barr virusfragment-based lead discoveryKaposi’s sarcoma associated herpesvirus (KSHV)latency-associated nuclear antigenprotein–DNA interactionsaturation transfer difference-nuclear magnetic resonancesurface plasmon resonance

Identifiers

PMID32290261
PMCPMC7180839
OpenAlexW3015400246

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.