Evidence map›Paper›PMID 32290091›Full record

ArticleInternational journal of molecular sciences2020

Interpretation of the Epigenetic Signature of Facioscapulohumeral Muscular Dystrophy in Light of Genotype-Phenotype Studies.

Ana Nikolic, Takako I Jones, Monica Govi, Fabiano Mele, Louise Maranda, Francesco Sera, Giulia Ricci, Lucia Ruggiero, Liliana Vercelli, Simona Portaro and 25 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  4. Deciphering Facioscapulohumeral Dystrophy in the clinical trials era: where are we now?Acta myologica : myopathies and cardiomyopathies : official journal of the Mediterranean Society of Myology · 2025
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  11. Cells · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 19 institutions in 4 countries.

Ana NikolicDepartment of Science of Life, Institute of Biology, University of Modena and Reggio Emilia, 41125 Modena, Italy.
Takako I JonesDepartment of Pharmacology, School of Medicine, University of Nevada, Reno, NV 89557, USA.
Monica GoviDepartment of Science of Life, Institute of Biology, University of Modena and Reggio Emilia, 41125 Modena, Italy.
Fabiano MeleCenter for Genome Research, University of Modena and Reggio Emilia, 41125 Modena, Italy.
Louise MarandaDepartment of Quantitative Health Sciences, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Francesco SeraDepartment of Public Health, Environments and Society, London School of Hygiene and Tropical Medicine, London WC1E 7HT, UK.
Giulia RicciDepartment of Clinical and Experimental Medicine, Neurological Clinic, 56126 Pisa, Italy.
Lucia RuggieroDepartment of Neurosciences and Reproductive and Odontostomatologic Sciences, University Federico II, 80137 Naples, Italy.
Liliana VercelliDepartment of Neurosciences "Rita Levi Montalcini", University of Turin, 10124 Turin, Italy.
Simona PortaroDepartment of Neuroscience, Mental Health and Sensory Organs, S. Andrea Hospital, University of Rome "Sapienza", 00185 Rome, Italy.ORCID 0000-0002-6379-1642
Luisa VillaDepartment of Neuroscience, Foundation IRCCS Ca' Granda, Ospedale Maggiore Policlinico, 20122 Milan, Italy.
Chiara FiorilloPediatric Neurology and Neuromuscular Disorders Unit, Department of Neurosciences, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health, University of Genoa, 16126 Genoa, Italy.
Lorenzo MaggiIRCCS Foundation, C. Besta Neurological Institute, 20133 Milan, Italy.ORCID 0000-0002-0932-5173
Lucio SantoroDepartment of Neurosciences and Reproductive and Odontostomatologic Sciences, University Federico II, 80137 Naples, Italy.
Giovanni AntoniniDepartment of Neuroscience, Mental Health and Sensory Organs, S. Andrea Hospital, University of Rome "Sapienza", 00185 Rome, Italy.
Massimiliano FilostoNeurology Clinic, ''Spedali Civili''. Hospital, 25123 Brescia, Italy.ORCID 0000-0002-2852-7512
Maurizio MoggioDepartment of Neuroscience, Foundation IRCCS Ca' Granda, Ospedale Maggiore Policlinico, 20122 Milan, Italy.
Corrado AngeliniOspedale S.Camillo IRCCS, Lido di Venezia, 20126 Venezia, Italy.ORCID 0000-0002-9554-8794
Elena PegoraroDepartment of Neurosciences, University of Padua, 35128 Padua, Italy.
Angela BerardinelliNeurology and Psychiatry, IRCCS Institute 'C.Mondino' Foundation, 27100 Pavia, Italy.
Maria Antonetta MaioliASL8, Centro Sclerosi Multipla, 09126 Cagliari, Italy.
Grazia D'AngeloDepartment of Neurorehabilitation, IRCCS Institute Eugenio Medea, 23842 Bosisio Parini, Italy.
Antonino Di MuzioCenter for Neuromuscular Disease, CeSI, University ''G. D'Annunzio'', 66100 Chieti, Italy.
Gabriele SicilianoDepartment of Clinical and Experimental Medicine, Neurological Clinic, 56126 Pisa, Italy.
Giuliano TomelleriDepartment of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, 41125 Modena, Italy.
Maurizio D'EspositoInstitute of Genetics and Biophysics, A. Buzzati Traverso, IGB, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.ORCID 0000-0003-4783-7572
Floriana Della RagioneInstitute of Genetics and Biophysics, A. Buzzati Traverso, IGB, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.ORCID 0000-0003-1643-6418
Arianna BrancaccioInstitute of Genetics and Biophysics, A. Buzzati Traverso, IGB, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.
Rachele PirasASL8, Centro Sclerosi Multipla, 09126 Cagliari, Italy.
Carmelo RodolicoDepartment of Clinical and Experimental Medicine, University of Messina, 98124 Messina, Italy.ORCID 0000-0003-2543-6356
Tiziana MonginiDepartment of Neurosciences "Rita Levi Montalcini", University of Turin, 10124 Turin, Italy.
Frederique MagdinierAix Marseille Univ, INSERM, MMG, U 1251, 13005 Marseille, France.ORCID 0000-0002-0159-9559
Valentina SalsiDepartment of Science of Life, Institute of Biology, University of Modena and Reggio Emilia, 41125 Modena, Italy.
Peter L JonesDepartment of Pharmacology, School of Medicine, University of Nevada, Reno, NV 89557, USA.
Rossella TuplerDepartment of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, 41125 Modena, Italy.ORCID 0000-0002-3797-1789
University of Modena and Reggio Emilia · ITInstitute of Genetics and Biophysics · ITAssociazione Italiana Sclerosi Multipla · ITAzienda Ospedaliera Sant'Andrea · ITFederico II University Hospital · ITFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · ITUniversity of Nevada, Reno · USUniversity of Turin · ITAzienda Socio Sanitaria Territoriale degli Spedali Civili di Brescia · ITInserm · FRIRCCS Eugenio Medea · ITIRCCS San Camillo Hospital · ITRoyal Society of Tropical Medicine and Hygiene · GBUniversity of Chieti-Pescara · ITUniversity of Genoa · ITUniversity of Massachusetts Chan Medical School · USUniversity of Messina · ITUniversity of Padua · ITUrology Foundation · GB

Funding

Mechanisms of DUX4 mediated FSHD pathologyR01AR062587 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI JONES, PETER L · 2013 to 2024
$5.3M
AFM-Téléthon 16593Fondazione Telethon GUP13012NIAMS NIH HHS R01 AR062587NIAMS NIH HHS R01AR062587Regione Emilia-Romagna RARER
6 · The paper itself

Abstract

Facioscapulohumeral muscular dystrophy (FSHD) is characterized by incomplete penetrance and intra-familial clinical variability. The disease has been associated with the genetic and epigenetic features of the D4Z4 repetitive elements at 4q35. Recently, D4Z4 hypomethylation has been proposed as a reliable marker in the FSHD diagnosis. We exploited the Italian Registry for FSHD, in which FSHD families are classified using the Clinical Comprehensive Evaluation Form (CCEF). A total of 122 index cases showing a classical FSHD phenotype (CCEF, category A) and 110 relatives were selected to test with the receiver operating characteristic (ROC) curve, the diagnostic and predictive value of D4Z4 methylation. Moreover, we performed DNA methylation analysis in selected large families with reduced penetrance characterized by the co-presence of subjects carriers of one D4Z4 reduced allele with no signs of disease or presenting the classic FSHD clinical phenotype. We observed a wide variability in the D4Z4 methylation levels among index cases revealing no association with clinical manifestation or disease severity. By extending the analysis to family members, we revealed the low predictive value of D4Z4 methylation in detecting the affected condition. In view of the variability in D4Z4 methylation profiles observed in our large cohort, we conclude that D4Z4 methylation does not mirror the clinical expression of FSHD. We recommend that measurement of this epigenetic mark must be interpreted with caution in clinical practice.

Indexed as

Epigenesis, GeneticEpigenomicsGenetic Association StudiesGenotypePhenotypeAllelesBiological Variation, PopulationDNA MethylationFamilyGenetic Predisposition to DiseaseHumansMuscular Dystrophy, FacioscapulohumeralPedigreeROC CurveD4Z4 reduced alleleDNA methylationFSHDgenotype–phenotype correlationmolecular diagnosis

Identifiers

PMID32290091
PMCPMC7178248
OpenAlexW3015376713

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.