Evidence map›Paper›PMID 32286626›Full record

ArticleNucleic acids research2020

Simultaneous measurement of biochemical phenotypes and gene expression in single cells.

Amanda L Richer, Kent A Riemondy, Lakotah Hardie, Jay R Hesselberth

Abstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Advancements in the Application of scRNA-Seq in Breast Research: A Review.International journal of molecular sciences · 2024
    Review
  4. A new era in functional genomics screens.Nature reviews. Genetics · 2022
    Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Amanda L RicherDepartment of Biochemistry and Molecular Genetics, Aurora, CO 80045, USA.
Kent A RiemondyRNA Bioscience Initiative, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Lakotah HardieDepartment of Biochemistry and Molecular Genetics, Aurora, CO 80045, USA.
Jay R HesselberthDepartment of Biochemistry and Molecular Genetics, Aurora, CO 80045, USA.

Funding

Nanopore analysis of transfer RNA forms and functionsR35GM119550 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI Jay R Hesselberth · 2016 to 2026
$4.5M
Predoctoral Training Program in Molecular and Cellular Biology (Supplement: Mentoring in the Research Environment)T32GM136444 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI MICHAEL A MCMURRAY, Rytis Prekeris · 2020 to 2026
$3.7M
Biochemistry at single-cell resolution: a new approach to understand functional heterogeneityR01AG071467 · NIA · UNIVERSITY OF COLORADO DENVER · PI HESSELBERTH, JAY R · 2020 to 2024
$3.2M
NIA NIH HHS R01 AG071467NIGMS NIH HHS R35 GM119550NIGMS NIH HHS T32 GM136444
6 · The paper itself

Abstract

Methods to measure heterogeneity among cells are rapidly transforming our understanding of biology but are currently limited to molecular abundance measurements. We developed an approach to simultaneously measure biochemical activities and mRNA abundance in single cells to understand the heterogeneity of DNA repair activities across thousands of human lymphocytes, identifying known and novel cell-type-specific DNA repair phenotypes.

Indexed as

DNA RepairGene ExpressionCell LineGenomicsHigh-Throughput Nucleotide SequencingHumansLymphocytesPhenotypeRNA, MessengerRNA-SeqSequence Analysis, DNASingle-Cell AnalysisRNA, Messenger

Identifiers

PMID32286626
PMCPMC7261187

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.