Evidence map›Paper›PMID 32286319›Full record

ArticleNPJ biofilms and microbiomes2020

Nonlinear rheological characteristics of single species bacterial biofilms.

Saikat Jana, Samuel G V Charlton, Lucy E Eland, J Grant Burgess, Anil Wipat, Thomas P Curtis, Jinju Chen

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 80 citations in OpenAlex.

  1. The EPS-I exopolysaccharide transformsProceedings of the National Academy of Sciences of the United States of America · 2026
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  5. Mechanical Comparison ofACS biomaterials science & engineering · 2025
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  11. Coacervate Dense Phase Displaces Surface-EstablishedJournal of the American Chemical Society · 2024
    Article
  12. Review
  13. Microstructural and Rheological Transitions in Bacterial Biofilms.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Modulation of Biofilm Mechanics by DNA Structure and Cell Type.ACS biomaterials science & engineering · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Saikat JanaSchool of Biomedical Sciences, University of Leeds, Leeds, UK. saikatjana@gmail.com.ORCID http://orcid.org/0000-0001-8053-2864
Samuel G V CharltonSchool of Engineering, Newcastle University, Newcastle Upon Tyne, UK.
Lucy E ElandInterdisciplinary Computing & Complex BioSystems Research Group, School of Computing, Newcastle University, Newcastle upon Tyne, UK.
J Grant BurgessSchool of Natural & Environmental Sciences, Newcastle University, Newcastle upon Tyne, UK.
Anil WipatInterdisciplinary Computing & Complex BioSystems Research Group, School of Computing, Newcastle University, Newcastle upon Tyne, UK.
Thomas P CurtisSchool of Engineering, Newcastle University, Newcastle Upon Tyne, UK.ORCID http://orcid.org/0000-0002-9009-1748
Jinju ChenSchool of Engineering, Newcastle University, Newcastle Upon Tyne, UK. Jinju.Chen@newcastle.ac.uk.
Newcastle University · GBNewcastle College · GBUniversity of Leeds · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial biofilms in natural and artificial environments perform a wide array of beneficial or detrimental functions and exhibit resistance to physical as well as chemical perturbations. In dynamic environments, where periodic or aperiodic flows over surfaces are involved, biofilms can be subjected to large shear forces. The ability to withstand these forces, which is often attributed to the resilience of the extracellular matrix. This attribute of the extracellular matrix is referred to as viscoelasticity and is a result of self-assembly and cross-linking of multiple polymeric components that are secreted by the microbes. We aim to understand the viscoelastic characteristic of biofilms subjected to large shear forces by performing Large Amplitude Oscillatory Shear (LAOS) experiments on four species of bacterial biofilms: Bacillus subtilis, Comamonas denitrificans, Pseudomonas fluorescens and Pseudomonas aeruginosa. We find that nonlinear viscoelastic measures such as intracycle strain stiffening and intracycle shear thickening for each of the tested species, exhibit subtle or distinct differences in the plot of strain amplitude versus frequency (Pipkin diagram). The biofilms also exhibit variability in the onset of nonlinear behaviour and energy dissipation characteristics, which could be a result of heterogeneity of the extracellular matrix constituents of the different biofilms. The results provide insight into the nonlinear rheological behaviour of biofilms as they are subjected to large strains or strain rates; a situation that is commonly encountered in nature, but rarely investigated.

Indexed as

Bacterial Physiological PhenomenaBacillus subtilisBiofilmsComamonasExtracellular MatrixPseudomonas aeruginosaPseudomonas fluorescensRheologyViscosity

Identifiers

PMID32286319
PMCPMC7156450
OpenAlexW3014858544

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.