Evidence map›Paper›PMID 32282803›Full record

ArticlePloS one2020

Environmental control on the distribution of metabolic strategies of benthic microbial mats in Lake Fryxell, Antarctica.

Megan L Dillon, Ian Hawes, Anne D Jungblut, Tyler J Mackey, Jonathan A Eisen, Peter T Doran, Dawn Y Sumner

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 3 countries.

Megan L DillonEcology Department, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America.ORCID 0000-0002-5706-6989
Ian HawesCoastal Marine Field Station, University of Waikato, Hamilton, Waikato, New Zealand.
Anne D JungblutLife Sciences Department, Natural History Museum, London, England, United Kingdom.
Tyler J MackeyDepartment of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Jonathan A EisenDepartment of Evolution and Ecology, University of California, Davis, Davis, California, United States of America.ORCID 0000-0002-0159-2197
Peter T DoranGeology and Geophysics Department, Louisiana State University, Baton Rouge, Louisiana, United States of America.
Dawn Y SumnerDepartment of Earth and Planetary Sciences, University of California, Davis, Davis, California, United States of America.
University of California, Davis · USLawrence Berkeley National Laboratory · USLouisiana State University · USMassachusetts Institute of Technology · USNatural History Museum · GBUniversity of Waikato · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ecological theories posit that heterogeneity in environmental conditions greatly affects community structure and function. However, the degree to which ecological theory developed using plant- and animal-dominated systems applies to microbiomes is unclear. Investigating the metabolic strategies found in microbiomes are particularly informative for testing the universality of ecological theories because microorganisms have far wider metabolic capacity than plants and animals. We used metagenomic analyses to explore the relationships between the energy and physicochemical gradients in Lake Fryxell and the metabolic capacity of its benthic microbiome. Statistical analysis of the relative abundance of metabolic marker genes and gene family diversity shows that oxygenic photosynthesis, carbon fixation, and flavin-based electron bifurcation differentiate mats growing in different environmental conditions. The pattern of gene family diversity points to the likely importance of temporal environmental heterogeneity in addition to resource gradients. Overall, we found that the environmental heterogeneity of photosynthetically active radiation (PAR) and oxygen concentration ([O2]) in Lake Fryxell provide the framework by which metabolic diversity and composition of the community is structured, in accordance with its phylogenetic structure. The organization of the resulting microbial ecosystems are consistent with the maximum power principle and the species sorting model.

Indexed as

Antarctic RegionsBacteriaCarbon CycleGeologic SedimentsLakesMetagenomeMicrobiotaOxygenPhotosynthesisPhylogenyOxygen

Identifiers

PMID32282803
PMCPMC7153904
OpenAlexW3015438431

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.