Evidence map›Paper›PMID 32282333›Full record

ArticleAging2020

Survival-associated alternative splicing signatures in non-small cell lung cancer.

Deze Zhao, Chuantao Zhang, Man Jiang, Yongjie Wang, Yu Liang, Li Wang, Kang Qin, Faisal Ul Rehman, Xiaochun Zhang

Open access · greenAbstract read
In one paragraph

Article in Aging, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Identification of prognostic alternative splicing signature in gastric cancer.Archives of public health = Archives belges de sante publique · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Deze ZhaoDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Chuantao ZhangDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Man JiangDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Yongjie WangDepartment of Thoracic Surgery; The Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Yu LiangDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Li WangDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Kang QinDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Faisal Ul RehmanDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Xiaochun ZhangDepartment of Medical Oncology, the Affiliated Hospital of Qingdao University, Qingdao University, Qingdao 266003, China.
Affiliated Hospital of Qingdao University · CNQingdao University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alternative splicing (AS) is fundamental to transcriptome and proteome richness, and data from recent studies suggested a critical association between AS and oncogenic processes. To date, no systematic analysis has been conducted on AS from the perspective of different sexes and subtypes in non-small-cell lung cancer (NSCLC). Thus, we integrated the information of NSCLC patients from The Cancer Genome Atlas (TCGA) and evaluated AS profiles from the perspectives of sex and subtype. Eventually, a total of 813 and 1020 AS events were found to be significantly related to the overall survival (OS) of lung adenocarcinoma (LUAD) and lung squamous cell carcinoma (LUSC) patients. Four prognostic prediction models performed well at 1, 3, and 5 years, with an area under the receiver operating characteristic (ROC) curve (AUC) greater than 0.75. Notably, we explored the upstream splicing factors (SFs) and downstream regulatory mechanisms of the OS-associated AS events and verified four differentially expressed alternative splicing (DEAS) events via qPCR. These findings can provide important guidance for subsequent studies. In addition, we also constructed nomograms to facilitate early screening by clinicians and to determine patient outcomes in NSCLC.

Indexed as

Alternative SplicingBiomarkers, TumorCarcinoma, Non-Small-Cell LungFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansLung NeoplasmsMaleMiddle AgedPrognosisSurvival RateBiomarkers, Tumoralternative splicing (AS)LUADLUSCTCGA

Identifiers

PMID32282333
PMCPMC7185095
OpenAlexW3015540461

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.