Evidence map›Paper›PMID 32281004›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2020

Development and deployment of KASP markers for multiple alleles of Lr34 in wheat.

Tilin Fang, Lei Lei, Genqiao Li, Carol Powers, Robert M Hunger, Brett F Carver, Liuling Yan

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Mapping a leaf rust resistance geneFrontiers in plant science · 2023
    Article
  10. Applications of Genomic Tools in Plant Breeding: Crop Biofortification.International journal of molecular sciences · 2022
    Review
  11. Genomic analysis for heat and combined heat-drought resilience in bread wheat under field conditions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  12. Identification of the major QTLFrontiers in plant science · 2022
    Article
  13. Transcriptome analysis and genetic diversity ofMitochondrial DNA. Part B, Resources · 2021
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Tilin FangDepartment of Plant and Soil Sciences Department, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA.
Lei LeiDepartment of Plant and Soil Sciences Department, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA.
Genqiao LiDepartment of Plant and Soil Sciences Department, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA.
Carol PowersDepartment of Plant and Soil Sciences Department, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA.
Robert M HungerEntomology and Plant Pathology Department, Oklahoma State University, Stillwater, OK, 74078, USA.
Brett F CarverDepartment of Plant and Soil Sciences Department, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA.
Liuling YanDepartment of Plant and Soil Sciences Department, Oklahoma State University, 368 AG Hall, Stillwater, OK, 74078, USA. liuling.yan@okstate.edu.ORCID http://orcid.org/0000-0003-1957-260X
Oklahoma State University · US

Funding

National Institute of Food and Agriculture 2011-68002-30029
6 · The paper itself

Abstract

key messageHeterogeneous Lr34 genes for leaf rust in winter wheat cultivar 'Duster' and KASP markers for allelic variation in exon 11 and exon 22 of Lr34. Wheat, Triticum aestivum (2n = 6x = 42, AABBDD), is a hexaploid species, and each of three homoeologous genomes A, B, and D should have one copy for a gene in its ancestral form if the gene has no duplication. Previously reported leaf rust resistance gene Lr34 has one copy on the short arm of chromosome 7D in hexaploid wheat, and allelic variation in Lr34 is in intron 4, exon 11, exon 12, or exon 22. In this study, we discovered that Oklahoma hard red winter wheat cultivar 'Duster' (PI 644,016) has two copies of the Lr34 gene, the resistance allele Lr34a and the susceptibility allele Lr34b. Both Lr34a and Lr34b were mapped in the same linkage group on chromosome 7D in a doubled-haploid population generated from a cross between Duster and a winter wheat cultivar 'Billings' which carries the susceptibility allele Lr34c. A chromosomal fragment including Lr34 and at least two neighboring genes on its proximal side but excluding genes on its distal side was duplicated in Duster. The Duster Lr34ab allele was associated with tip necrosis and increased resistance against leaf rust at adult plants in the Duster × Billings DH population tested in the field, demonstrating the function of the Duster Lr34ab allele in wheat. We have developed KASP markers for allelic variation in exon 11 and exon 22 of Lr34 in wheat. These markers can be utilized to accelerate the selection of Lr34 in wheat.

Indexed as

AllelesBasidiomycotaChromosome MappingChromosomes, PlantCrosses, GeneticDisease ResistanceExonsGenes, PlantGenetic LinkageGenetic VariationGenotypeHaploidyIntronsNecrosisPhenotypePlant Diseases

Identifiers

PMID32281004
PMCPMC7311377
OpenAlexW3015304962

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.