Evidence map›Paper›PMID 32280727›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2019

Multilayer feature selection method for polyp classification via computed tomographic colonography.

Weiguo Cao, Zhengrong Liang, Marc J Pomeroy, Kenneth Ng, Shu Zhang, Yongfeng Gao, Perry J Pickhardt, Matthew A Barish, Almas F Abbasi, Hongbing Lu

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Weiguo CaoState University of New York, Department of Radiology, Stony Brook, New York, United States.ORCID https://orcid.org/0000-0001-9181-6133
Zhengrong LiangState University of New York, Department of Radiology, Stony Brook, New York, United States.ORCID https://orcid.org/0000-0002-0720-8598
Marc J PomeroyState University of New York, Department of Radiology, Stony Brook, New York, United States.
Kenneth NgState University of New York, Department of Electrical and Computer Engineering, Stony Brook, New York, United States.
Shu ZhangState University of New York, Department of Radiology, Stony Brook, New York, United States.
Yongfeng GaoState University of New York, Department of Radiology, Stony Brook, New York, United States.
Perry J PickhardtUniversity of Wisconsin Medical School, Department of Radiology, Madison, Wisconsin, United States.ORCID https://orcid.org/0000-0002-5534-8202
Matthew A BarishState University of New York, Department of Radiology, Stony Brook, New York, United States.
Almas F AbbasiState University of New York, Department of Radiology, Stony Brook, New York, United States.
Hongbing LuThe Fourth Medical University, Department of of Biomedical Engineering, Xi'an, China.ORCID https://orcid.org/0000-0003-4181-7239

Funding

Advancing Virtual Colonoscopy for Early Cancer ScreeningR01CA206171 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI LIANG, JEROME Z · 2016 to 2020
$2.0M
NCI NIH HHS R01 CA206171
6 · The paper itself

Abstract

Polyp classification is a feature selection and clustering process. Picking the most effective features from multiple polyp descriptors without redundant information is a great challenge in this procedure. We propose a multilayer feature selection method to construct an optimized descriptor for polyp classification with a feature-grouping strategy in a hierarchical framework. First, the proposed method makes good use of image metrics, such as intensity, gradient, and curvature, to divide their corresponding polyp descriptors into several feature groups, which are the preliminary units of this method. Then each preliminary unit generates two ranked descriptors, i.e., their optimized variable groups (OVGs) and preliminary classification measurements. Next, a feature dividing-merging (FDM) algorithm is designed to perform feature merging operation hierarchically and iteratively. Unlike traditional feature selection methods, the proposed FDM algorithm includes two steps for feature dividing and feature merging. At each layer, feature dividing selects the OVG with the highest area under the receiver operating characteristic curve (AUC) as the baseline while other descriptors are treated as its complements. In the fusion step, the FDM merges some variables with gains into the baseline from the complementary descriptors iteratively on every layer until the final descriptor is obtained. This proposed model (including the forward step algorithm and the FDM algorithm) is a greedy method that guarantees clustering monotonicity of all OVGs from the bottom to the top layer. In our experiments, all the selected results from each layer are reported by both graphical illustration and data analysis. Performance of the proposed method is compared to five existing classification methods by a polyp database of 63 samples with pathological reports. The experimental results show that our proposed method outperforms other methods by 4% to 23% gains in terms of AUC scores.

Indexed as

classificationcolon polypcomputer-aided diagnosisfeature selectionmachine learningtexture descriptor

Identifiers

PMID32280727
PMCPMC7144683

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.