Evidence map›Paper›PMID 32280726›Full record

ArticleMolecular therapy. Methods & clinical development2020

Pooled Screens Identify

W Hans Meisen, Zahra Bahrami Nejad, Miki Hardy, Huiren Zhao, Oliver Oliverio, Songli Wang, Christopher Hale, Michael M Ollmann, Patrick J Collins

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Methods & clinical development, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 54 citations in OpenAlex.

  1. CRISPR-Cas9 screening revealsMolecular therapy. Advances · 2026
    Article
  2. Review
  3. Review
  4. Consequences of human genetic variations inMolecular therapy. Advances · 2026
    Article
  5. Identification of CD164 as an essential entry receptor for divergent adeno-associated viruses.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Genomic loss of GPR108 disrupts AAV transduction in birds.bioRxiv : the preprint server for biology · 2024
    Article
  18. Article
  19. Review
  20. Casein kinase 2 activity is a host restriction factor for AAV transduction.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

W Hans MeisenGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Zahra Bahrami NejadGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Miki HardyGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Huiren ZhaoGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Oliver OliverioGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Songli WangGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Christopher HaleGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Michael M OllmannGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Patrick J CollinsGenome Analysis Unit, Amgen Research, South San Francisco, CA, USA.
Amgen (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adeno-associated virus (AAV) has been used extensively as a vector for gene therapy. Despite its widespread use, the mechanisms by which AAV enters the cell and is trafficked to the nucleus are poorly understood. In this study, we performed two pooled, genome-wide screens to identify positive and negative factors modulating AAV2 transduction. Genome-wide libraries directed against all human genes with four designs per gene or eight designs per gene were transduced into U-2 OS cells. These pools were transduced with AAV2 encoding EGFP and sorted based on the intensity of EGFP expression. Analysis of enriched and depleted barcodes in the sorted samples identified several genes that putatively decreased AAV2 transduction. A subset of screen hits was validated in flow cytometry and imaging studies. In addition to

Indexed as

AAVAAV2AAV5GPR108KIAA0319LNDST1pooled screenTM9SF2

Identifiers

PMID32280726
PMCPMC7139131
OpenAlexW3010938787

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.