Evidence map›Paper›PMID 32276273›Full record

ArticleBlood2020

E2A-PBX1 functions as a coactivator for RUNX1 in acute lymphoblastic leukemia.

Wen-Chieh Pi, Jun Wang, Miho Shimada, Jia-Wei Lin, Huimin Geng, Yu-Ling Lee, Rui Lu, Dongxu Li, Gang Greg Wang, Robert G Roeder and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Biomolecular condensates in immune cell fate.Nature reviews. Immunology · 2025
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Comprehensive summary: the role of PBX1 in development and cancers.Frontiers in cell and developmental biology · 2024
    Review
  10. PBX1: a TALE of two seasons-key roles during development and in cancer.Frontiers in cell and developmental biology · 2024
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Mediator subunit MED1 is required for E2A-PBX1-mediated oncogenic transcription and leukemic cell growth.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. RUNX1 Upregulates CENPE to Promote Leukemic Cell Proliferation.Frontiers in molecular biosciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Wen-Chieh PiInstitute of Biochemistry and Molecular Biology and.
Jun WangLineberger Comprehensive Cancer Center and.
Miho ShimadaLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY.
Jia-Wei LinDepartment of Medicine, National Yang-Ming University, Taipei, Taiwan.
Huimin GengLaboratory Medicine, UCSF School of Medicine, San Francisco, CA; and.
Yu-Ling LeeLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY.
Rui LuLineberger Comprehensive Cancer Center and.
Dongxu LiLineberger Comprehensive Cancer Center and.
Gang Greg WangLineberger Comprehensive Cancer Center and.
Robert G RoederLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY.
Wei-Yi ChenInstitute of Biochemistry and Molecular Biology and.
University of North Carolina at Chapel Hill · USNational Yang Ming Chiao Tung University · TWRockefeller University · USUniversity of California, San Francisco · US

Funding

Function and targeting of a stable transcription factor complex in leukemiaR01CA163086 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2011 to 2022
$3.6M
Transcriptional regulatory mechanisms in B cell development and leukemogenesisR01CA178765 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2013 to 2017
$2.8M
NCI NIH HHS R01 CA163086NCI NIH HHS R01 CA178765
6 · The paper itself

Abstract

E2A, a basic helix-loop-helix transcription factor, plays a crucial role in determining tissue-specific cell fate, including differentiation of B-cell lineages. In 5% of childhood acute lymphoblastic leukemia (ALL), the t(1,19) chromosomal translocation specifically targets the E2A gene and produces an oncogenic E2A-PBX1 fusion protein. Although previous studies have shown the oncogenic functions of E2A-PBX1 in cell and animal models, the E2A-PBX1-enforced cistrome, the E2A-PBX1 interactome, and related mechanisms underlying leukemogenesis remain unclear. Here, by unbiased genomic profiling approaches, we identify the direct target sites of E2A-PBX1 in t(1,19)-positive pre-B ALL cells and show that, compared with normal E2A, E2A-PBX1 preferentially binds to a subset of gene loci cobound by RUNX1 and gene-activating machineries (p300, MED1, and H3K27 acetylation). Using biochemical analyses, we further document a direct interaction of E2A-PBX1, through a region spanning the PBX1 homeodomain, with RUNX1. Our results also show that E2A-PBX1 binding to gene enhancers is dependent on the RUNX1 interaction but not the DNA-binding activity harbored within the PBX1 homeodomain of E2A-PBX1. Transcriptome analyses and cell transformation assays further establish a significant RUNX1 requirement for E2A-PBX1-mediated target gene activation and leukemogenesis. Notably, the RUNX1 locus itself is also directly activated by E2A-PBX1, indicating a multilayered interplay between E2A-PBX1 and RUNX1. Collectively, our study provides the first unbiased profiling of the E2A-PBX1 cistrome in pre-B ALL cells and reveals a previously unappreciated pathway in which E2A-PBX1 acts in concert with RUNX1 to enforce transcriptome alterations for the development of pre-B ALL.

Indexed as

Amino Acid MotifsCell Line, TumorCell Transformation, NeoplasticCore Binding Factor Alpha 2 SubunitDNAEnhancer Elements, GeneticGene Expression Regulation, LeukemicHistone CodeHomeodomain ProteinsHumansMediator ComplexNeoplasm ProteinsOncogene Proteins, Fusionp300-CBP Transcription FactorsPrecursor B-Cell Lymphoblastic Leukemia-LymphomaProtein DomainsCore Binding Factor Alpha 2 SubunitDNAE2A-Pbx1 fusion proteinHomeodomain ProteinsMediator ComplexNeoplasm ProteinsOncogene Proteins, Fusionp300-CBP Transcription FactorsRNA, MessengerRNA, NeoplasmRUNX1 protein, human

Identifiers

PMID32276273
PMCPMC7332894
OpenAlexW3015417433

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.