Evidence map›Paper›PMID 32275964›Full record

ArticleBiochimica et biophysica acta. Gene regulatory mechanisms2020

Selective repression of the Drosophila cyclin B promoter by retinoblastoma and E2F proteins.

Rima Mouawad, Pamela Himadewi, Dhruva Kadiyala, David N Arnosti

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Gene regulatory mechanisms, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Soft repression: Subtle transcriptional regulation with global impact.BioEssays : news and reviews in molecular, cellular and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rima MouawadGraduate Program in Cell and Molecular Biology, Michigan State University, East Lansing, MI 48824, United States of America. Electronic address: mouawadr@msu.edu.
Pamela HimadewiDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, United States of America.
Dhruva KadiyalaDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, United States of America.
David N ArnostiGraduate Program in Cell and Molecular Biology, Michigan State University, East Lansing, MI 48824, United States of America; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, United States of America. Electronic address: arnosti@msu.edu.
Michigan State University · US

Funding

Biochemical, Genomic and Computational Analysis of Transcriptional RepressionR01GM124137 · NIGMS · MICHIGAN STATE UNIVERSITY · PI ARNOSTI, DAVID N · 2017 to 2020
$1.2M
NIGMS NIH HHS R01 GM124137
6 · The paper itself

Abstract

The Cyclin B1 gene encodes a G2/M cyclin that is deregulated in various human cancers, however, the transcriptional regulation of this gene is incompletely understood. The E2F and retinoblastoma family of proteins are involved in this gene's regulation, but there is disagreement on which of the E2F and retinoblastoma proteins interact with the promoter to regulate this gene. Here, we dissect the promoter region of the Drosophila CycB gene, and study the role of Rbf and E2F factors in its regulation. This gene exhibits remarkable features that distinguish it from G1/S regulated promoters, such as PCNA. The promoter is comprised of modular elements with dedicated repressor and activator functions, including a segment spanning the first intron that interferes with a 5' activator element. A highly active minimal promoter (-464, +100) is repressed by the Rbf1 retinoblastoma protein, but much more potently repressed by the Rbf2 protein, which has been linked in other studies to control of cell growth genes. Unlike many other cell-cycle genes, which are activated by E2F1 and repressed by E2F2, CycB is potently activated by E2F2, and repressed by E2F1. Although the bulk of Rbf binding is associated with a region 5' of the core promoter, E2F and retinoblastoma proteins functionally interact with the basal promoter region, in part through a conserved E2F site at -80 bp. The specific regulatory requirements of this late cell cycle promoter appear to be linked to the unique activities of E2F and retinoblastoma family members acting on a complex cis-regulatory circuit.

Indexed as

Promoter Regions, GeneticTranscriptional ActivationAnimalsCell LineConserved SequenceCyclin BDrosophila melanogasterDrosophila ProteinsIntronsProtein BindingRetinoblastoma ProteinTranscription FactorsCycB protein, DrosophilaCyclin BDrosophila ProteinsE2f1 protein, DrosophilaRbf protein, DrosophilaRetinoblastoma ProteinTranscription FactorsCyclin BDrosophilaPromoterRbf1Rbf2RetinoblastomaTranscription

Identifiers

PMID32275964
PMCPMC7330510
OpenAlexW3016232319

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.