Evidence map›Paper›PMID 32275806›Full record

ArticleThe oncologist2020

Prognostic Value of DNA Damage Response Genomic Alterations in Relapsed/Advanced Urothelial Cancer.

Ming Yin, Petros Grivas, Qi-En Wang, Amir Mortazavi, Hamid Emamekhoo, Sheldon L Holder, Joseph J Drabick, Michele Sue-Ann Woo, Sumanta Pal, Monali Vasekar and 4 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in The oncologist, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04872036 (Investigation of Prognostic Biomarkers in Patients With Urothelial Carcinoma Treated With Platinum Regimens), which is not on this map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04872036 completednot on this map

Investigation of Prognostic Biomarkers in Patients With Urothelial Carcinoma Treated With Platinum Regimens

TypeobservationalSponsorHellenic Cooperative Oncology GroupRan2000 to 2017Enrolled66ConditionsBladder Cancer
3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. ATR Inhibition in Advanced Urothelial Carcinoma.Clinical genitourinary cancer · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
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  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Ming YinThe Ohio State University Comprehensive Cancer Center, Columbus, Ohio, USA.
Petros GrivasCleveland Clinic Taussig Cancer Institute, Cleveland, Ohio, USA.
Qi-En WangThe Ohio State University Comprehensive Cancer Center, Columbus, Ohio, USA.
Amir MortazaviThe Ohio State University Comprehensive Cancer Center, Columbus, Ohio, USA.
Hamid EmamekhooUniversity of Wisconsin Carbone Cancer Center, Madison, Wisconsin, USA.
Sheldon L HolderPenn State Cancer Institute, Hershey, Pennsylvania, USA.
Joseph J DrabickPenn State Cancer Institute, Hershey, Pennsylvania, USA.
Michele Sue-Ann WooFoundation Medicine, Cambridge, Massachusetts, USA.
Sumanta PalCity of Hope, Duarte, California, USA.
Monali VasekarPenn State Cancer Institute, Hershey, Pennsylvania, USA.
Edmund FolefacThe Ohio State University Comprehensive Cancer Center, Columbus, Ohio, USA.
Steven K ClintonThe Ohio State University Comprehensive Cancer Center, Columbus, Ohio, USA.
Paul MonkThe Ohio State University Comprehensive Cancer Center, Columbus, Ohio, USA.
Monika JoshiPenn State Cancer Institute, Hershey, Pennsylvania, USA.
The Ohio State University · USPenn State Milton S. Hershey Medical Center · USCity of Hope · USCleveland Clinic · USFoundation Medicine (United States)University of Wisconsin Carbone Cancer Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDNA damage response (DDR) genomic alterations may play an important role in clinical outcomes of patients with urothelial cancer (UC). However, data on the prognostic role of DDR gene alterations in patients with advanced UC remain unclear. MATERIALS AND

methodsWe retrospectively collected data of three independent patient cohorts with relapsed or advanced UC including 81 and 91 patients from four institutions who underwent FoundationOne genomic sequencing as well as 129 patients selected from The Cancer Genome Atlas bladder cohort. Fisher's exact test was used to determine differences of mutation frequency among the three cohorts. Logistic regression analysis was performed to calculate odds ratio (OR) and 95% confidence interval (CI). Overall survival (OS) was measured from time of initial diagnosis and Cox proportional hazard regression analysis was performed to calculate the hazard ratio (HR) and 95% CI.

resultsDDR genomic alterations were present in 76.5% (62/81), 40.7% (37/91), and 51.2% (66/129) of the three cohorts. ATM alterations consistently correlated with significantly shorter OS, whereas other DDR alterations (excluding ATM) were associated with better prognosis. In 152 patients treated with platinum pooled from the three cohorts, the prognostic value of alterations in ATM as compared with other predefined DDR genes was substantially different (ATM: adjusted HR [HR], 2.03; 95% CI, 1.03-4; p = .04; other DDR: adjusted HR, 0.49; 95% CI, 0.31-0.8; p = .003).

conclusionsGenomic alterations in ATM and other DDR genes may have opposite prognostic value in relapsed and/or advanced UC. ATM may have a complex role in UC progression. IMPLICATIONS FOR PRACTICE: Somatic mutations of DNA damage response (DDR) genes are frequently found in urothelial cancer and appear to play an important role in tumorigenesis, progression, treatment response, and outcomes. In a set of DDR genes, ATM alterations were associated with worse survival, while other alterations were associated with better survival in advanced urothelial cancer. The results of this study suggest a complex role of ATM in tumor progression and call for further studies to determine the underlying mechanisms and biomarker clinical utility.

Indexed as

DNA DamageNeoplasm Recurrence, LocalGenomicsHumansMutationPrognosisRetrospective StudiesATMBladder cancerDNA repairGenomic alterationsPrognosis

Identifiers

PMID32275806
PMCPMC7418353
OpenAlexW3016192875

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.