Evidence map›Paper›PMID 32272747›Full record

ArticleViruses2020

Amino Acid Substitutions in Positions 385 and 393 of the Hydrophobic Region of VP4 May Be Associated with Rotavirus Attenuation and Cell Culture Adaptation.

Yusheng Guo, David E Wentworth, Karla M Stucker, Rebecca A Halpin, Ham Ching Lam, Douglas Marthaler, Linda J Saif, Anastasia N Vlasova

Abstract read
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yusheng GuoFood Animal Health Research Program, Ohio Agricultural Research and Development Center, Department of Veterinary Preventive Medicine, The Ohio State University, Wooster, OH 44691, USA.
David E WentworthCenters for Disease Control and Prevention, Atlanta, GA 30333, USA.
Karla M StuckerJ. Craig Venter Institute, Rockville, MD 20850, USA.
Rebecca A HalpinJ. Craig Venter Institute, Rockville, MD 20850, USA.
Ham Ching LamVeterinary Diagnostic Laboratory, University of Minnesota, Saint Paul, MN 55108, USA.
Douglas MarthalerVeterinary Diagnostic Laboratory, College of Veterinary Medicine, Kansas State University, Manhattan, KS 66506, USA.
Linda J SaifFood Animal Health Research Program, Ohio Agricultural Research and Development Center, Department of Veterinary Preventive Medicine, The Ohio State University, Wooster, OH 44691, USA.
Anastasia N VlasovaFood Animal Health Research Program, Ohio Agricultural Research and Development Center, Department of Veterinary Preventive Medicine, The Ohio State University, Wooster, OH 44691, USA.ORCID 0000-0002-1447-6283

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rotaviruses (RVs) are the leading cause of the acute viral gastroenteritis in young children and livestock animals worldwide. Although live attenuated vaccines have been applied to control RV infection for many years, the underlying mechanisms of RV attenuation following cell culture adaption are unknown. To study these mechanisms at the genomic level, we have sequenced and conducted a comparative analysis of two virulent human (Wa, G1P

Indexed as

Amino Acid SubstitutionCell Culture TechniquesVirus CultivationAdaptation, PhysiologicalAnimalsCapsid ProteinsCell LineChlorocebus aethiopsGenome, ViralGerm-Free LifeHumansHydrophobic and Hydrophilic InteractionsMutationRotavirusSerial PassageSwineCapsid ProteinsVP4 protein, Rotavirusattenuationcell culture adaptationrotavirusvaccineVP4

Identifiers

PMID32272747
PMCPMC7232350

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.