Evidence map›Paper›PMID 32271005›Full record

ArticleAnalytical chemistry2020

Identifying Sialylation Linkages at the Glycopeptide Level by Glycosyltransferase Labeling Assisted Mass Spectrometry (GLAMS).

He Zhu, Shuaishuai Wang, Ding Liu, Lang Ding, Congcong Chen, Yunpeng Liu, Zhigang Wu, Roni Bollag, Kebin Liu, William Max Alexander and 4 more

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Chemical reporters to study mammalian O-glycosylation.Biochemical Society transactions · 2021
    Review
  4. Article
  5. Towards structure-focused glycoproteomics.Biochemical Society transactions · 2021
    Review
  6. Glycoproteomics Technologies in Glycobiotechnology.Advances in biochemical engineering/biotechnology · 2021
    Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

He ZhuDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.ORCID 0000-0002-9925-2640
Shuaishuai WangDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.
Ding LiuDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.
Lang DingDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.
Congcong ChenDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.
Yunpeng LiuDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.
Zhigang WuDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.
Roni BollagGeorgia Cancer Center, Augusta University, Augusta, Georgia 30912, United States.ORCID 0000-0003-4963-6619
Kebin LiuDepartment of Biochemistry and Molecular Biology, Augusta University, Augusta, Georgia 30912, United States.
William Max AlexanderDepartment of Cancer Biology and Blais Proteomics Center, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, United States.
Jun YinDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.
Cheng MaDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.ORCID 0000-0002-0017-2182
Lei LiDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.ORCID 0000-0002-1146-0761
Peng George WangDepartment of Chemistry, Georgia State University, Atlanta, Georgia 30303, United States.ORCID 0000-0003-3335-6794
Georgia State University · USAugusta University · USAugusta University Health · USDana-Farber Cancer Institute · US

Funding

Temple Project 1: Genetic characterization of factor VIII Inhibitors and glydosylation patternsU54HL142019 · NHLBI · TEMPLE UNIV OF THE COMMONWEALTH · PI LI, LEI, MIAO, CAROL H · 2018 to 2022
$6.9M
Facile Synthesis of O-Glycans and O-GlycopeptidesU01GM116263 · NIGMS · GEORGIA STATE UNIVERSITY · PI LI, LEI · 2015 to 2018
$2.2M
NHLBI NIH HHS U54 HL142019NIGMS NIH HHS U01 GM116263
6 · The paper itself

Abstract

Precise assignment of sialylation linkages at the glycopeptide level is of importance in bottom-up glycoproteomics and an indispensable step to understand the function of glycoproteins in pathogen-host interactions and cancer progression. Even though some efforts have been dedicated to the discrimination of α2,3/α2,6-sialylated isomers, unambiguous identification of sialoglycopeptide isomers is still needed. Herein, we developed an innovative glycosyltransferase labeling assisted mass spectrometry (GLAMS) strategy. After specific enzymatic labeling, oxonium ions from higher-energy C-trap dissociation (HCD) fragmentation of α2,3-sailoglycopeptides then generate unique reporters to distinctly differentiate those of α2,6-sailoglycopeptide isomers. With this strategy, a total of 1236 linkage-specific sialoglycopeptides were successfully identified from 161 glycoproteins in human serum.

Indexed as

Amino Acid SequenceAnimalsAzidesBacterial ProteinsBlood ProteinsCampylobacter jejuniCarbohydrate SequenceCattleChromatography, High Pressure LiquidFetuinsGlycosylationHexosaminesHumansIsomerismMonomeric GTP-Binding ProteinsSialoglycoproteinsAzidesBacterial ProteinsBlood ProteinsCgtA protein, bacteriaFetuinsHexosaminesMonomeric GTP-Binding ProteinsN-azidoacetylmannosamineSialoglycoproteins

Identifiers

PMID32271005
PMCPMC7750919
OpenAlexW3015567538

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.