Evidence map›Paper›PMID 32270547›Full record

ArticleMagnetic resonance in medicine2020

Extreme MRI: Large-scale volumetric dynamic imaging from continuous non-gated acquisitions.

Frank Ong, Xucheng Zhu, Joseph Y Cheng, Kevin M Johnson, Peder E Z Larson, Shreyas S Vasanawala, Michael Lustig

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Motion Mitigation Techniques for Abdominal and Cardiac MR Imaging.Journal of magnetic resonance imaging : JMRI · 2026
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Reproducible Research Practices in Magnetic Resonance Neuroimaging: A Review Informed by Advanced Language Models.Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine · 2024
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Frank OngElectrical Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-9789-8683
Xucheng ZhuUC Berkeley-UCSF Graduate Program in Bioengineering, University of California, San Francisco, CA, USA.ORCID 0000-0002-5537-5542
Joseph Y ChengDepartment of Radiology, Stanford University, Stanford, CA, USA.
Kevin M JohnsonMedical Physics, University of Wisconsin, Madison, WI, USA.
Peder E Z LarsonRadiology and Biomedical Imaging, University of California, San Francisco, CA, USA.
Shreyas S VasanawalaDepartment of Radiology, Stanford University, Stanford, CA, USA.
Michael LustigElectrical Engineering and Computer Sciences, University of California, Berkeley, CA, USA.

Funding

Rapid Robust Pediatric MRIR01EB009690 · NIBIB · STANFORD UNIVERSITY · PI LUSTIG, MICHAEL, VASANAWALA, SHREYAS S · 2010 to 2021
$5.6M
MRI methods for high resolution imaging of the lungR01HL136965 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSON, KEVIN MICHAEL, LARSON, PEDER ERIC ZUFALL · 2018 to 2021
$2.7M
Development and Validation of Radiation-Free Pediatric Renal Function QuantificationR01EB026136 · NIBIB · STANFORD UNIVERSITY · PI VASANAWALA, SHREYAS S · 2018 to 2021
$2.7M
Interoperable Software Platform for Reproducible Research and Clinical Translation of MRIU24EB029240 · NIBIB · UNIVERSITY OF CALIFORNIA BERKELEY · PI LUSTIG, MICHAEL, UECKER, MARTIN · 2019 to 2023
$1.6M
NHLBI NIH HHS R01 HL136965NIBIB NIH HHS R01 EB009690NIBIB NIH HHS R01 EB026136NIBIB NIH HHS U24 EB029240
6 · The paper itself

Abstract

purposeTo develop a framework to reconstruct large-scale volumetric dynamic MRI from rapid continuous and non-gated acquisitions, with applications to pulmonary and dynamic contrast-enhanced (DCE) imaging. THEORY AND

methodsThe problem considered here requires recovering 100 gigabytes of dynamic volumetric image data from a few gigabytes of k-space data, acquired continuously over several minutes. This reconstruction is vastly under-determined, heavily stressing computing resources as well as memory management and storage. To overcome these challenges, we leverage intrinsic three-dimensional (3D) trajectories, such as 3D radial and 3D cones, with ordering that incoherently cover time and k-space over the entire acquisition. We then propose two innovations: (a) A compressed representation using multiscale low-rank matrix factorization that constrains the reconstruction problem, and reduces its memory footprint. (b) Stochastic optimization to reduce computation, improve memory locality, and minimize communications between threads and processors. We demonstrate the feasibility of the proposed method on DCE imaging acquired with a golden-angle ordered 3D cones trajectory and pulmonary imaging acquired with a bit-reversed ordered 3D radial trajectory. We compare it with "soft-gated" dynamic reconstruction for DCE and respiratory-resolved reconstruction for pulmonary imaging.

resultsThe proposed technique shows transient dynamics that are not seen in gating-based methods. When applied to datasets with irregular, or non-repetitive motions, the proposed method displays sharper image features.

conclusionsWe demonstrated a method that can reconstruct massive 3D dynamic image series in the extreme undersampling and extreme computation setting.

Indexed as

Contrast MediaImage Interpretation, Computer-AssistedAlgorithmsImage EnhancementImage Processing, Computer-AssistedImaging, Three-DimensionalLungMagnetic Resonance ImagingContrast MediaDCE-MRI, multiscale low rankPulmonary MRIstochastic optimizationvolumetric dynamic MRI

Identifiers

PMID32270547
PMCPMC7973001

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.