Evidence map›Paper›PMID 32269674›Full record

ArticleInternational journal of clinical and experimental pathology2020

Molecular mechanisms and prognostic markers in head and neck squamous cell carcinoma: a bioinformatic analysis.

Yang Wang, Yu Hu, Lei Chen, Jing Wu, Kaile Wu, Juan Du, Haowei Xue, Bing Shen

Open access · greenAbstract read
In one paragraph

Article in International journal of clinical and experimental pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yang WangSchool of Basic Medical Sciences, Anhui Medical University Hefei 230022, Anhui, China.
Yu HuDepartment of Otorhinolaryngology, Head and Neck Surgery, Lu'an People's Hospital, Lu'an Affiliated Hospital of Anhui Medical University Lu'an 237000, Anhui, China.
Lei ChenDepartment of Urology, The First Affiliated Hospital of Anhui Medical University Hefei 230022, Anhui, China.
Jing WuDepartment of Otorhinolaryngology, Head and Neck Surgery, The First Affiliated Hospital of Anhui Medical University Hefei 230022, Anhui, China.
Kaile WuDepartment of Otorhinolaryngology, Head and Neck Surgery, The First Affiliated Hospital of Anhui Medical University Hefei 230022, Anhui, China.
Juan DuSchool of Basic Medical Sciences, Anhui Medical University Hefei 230022, Anhui, China.
Haowei XueDepartment of Oral and Maxillofacial Surgery, The First Affiliated Hospital of Anhui Medical University Hefei 230022, Anhui, China.
Bing ShenSchool of Basic Medical Sciences, Anhui Medical University Hefei 230022, Anhui, China.
Anhui Medical University · CNLu'an First People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of the present study was to enhance understanding of the molecular mechanisms underpinning head and neck squamous cell carcinoma (HNSCC). Microarray datasets were obtained from the gene expression omnibus database. By a bioinformatics method, 109 differentially expressed genes were identified between the two mRNA datasets, and these genes were classified primarily into biological process, molecular function, or cellular component. In the protein-protein interaction network analysis, top 20 hub genes were identified, and five (SERPINE1, SERPINH1, SPP1, PLAU and MMP1) of them were associated with the prognosis of HNSCC patients. Immunohistochemistry result also showed that the expression of the proteins encoded by these five genes were significantly upregulated in HNSCC, matching the bioinformatics analysis. Moreover, 28 differentially expressed miRNAs were also identified, with miR-196a and miR-1 being most upregulated and downregulated respectively. Our results provide potential biomarkers for HNSCC and may improve understanding of the molecular mechanisms underlying HNSCC.

Indexed as

biomarkergene expression omnibus databaseHead and neck squamous cell carcinomaoverall survival

Identifiers

PMID32269674
PMCPMC7137004
OpenAlexW3026237563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.