Evidence map›Paper›PMID 32268116›Full record

ArticleCell metabolism2020

ZBTB1 Regulates Asparagine Synthesis and Leukemia Cell Response to L-Asparaginase.

Robert T Williams, Rohiverth Guarecuco, Leah A Gates, Douglas Barrows, Maria C Passarelli, Bryce Carey, Lou Baudrier, Swarna Jeewajee, Konnor La, Benjamin Prizer and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell metabolism, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 3 institutions in 1 country.

Robert T WilliamsLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Rohiverth GuarecucoLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Leah A GatesLaboratory of Chromatin Biology and Epigenetics, The Rockefeller University, New York, NY 10065, USA.
Douglas BarrowsLaboratory of Chromatin Biology and Epigenetics, The Rockefeller University, New York, NY 10065, USA.
Maria C PassarelliLaboratory of Systems Cancer Biology, The Rockefeller University, New York, NY 10065, USA.
Bryce CareyLaboratory of Chromatin Biology and Epigenetics, The Rockefeller University, New York, NY 10065, USA.
Lou BaudrierLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Swarna JeewajeeLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Konnor LaLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Benjamin PrizerLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Sohail MalikThe Laboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065, USA.
Javier Garcia-BermudezLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Xiphias Ge ZhuLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA.
Jason CantorMorgridge Institute for Research, Madison, WI 53715, USA.
Henrik MolinaProteomics Resource Center, The Rockefeller University, New York, NY 10065, USA.
Thomas CarrollBioinformatics Resource Center, The Rockefeller University, New York, NY 10065, USA.
Robert G RoederThe Laboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065, USA.
Omar Abdel-WahabHuman Oncology and Pathogenesis Program and Leukemia Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
C David AllisLaboratory of Chromatin Biology and Epigenetics, The Rockefeller University, New York, NY 10065, USA.
Kıvanç BirsoyLaboratory of Metabolic Regulation and Genetics, The Rockefeller University, New York, NY, USA. Electronic address: kbirsoy@rockefeller.edu.
Rockefeller University · USMemorial Sloan Kettering Cancer Center · USMorgridge Institute for Research · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Function and targeting of a stable transcription factor complex in leukemiaR01CA163086 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2011 to 2022
$3.6M
Transcriptional regulatory mechanisms in B cell development and leukemogenesisR01CA178765 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2013 to 2017
$2.8M
Dissecting tumor metabolic heterogeneity in vivoDP2CA228042 · NCI · ROCKEFELLER UNIVERSITY · PI BIRSOY, KIVANC · 2017 to 2017
$2.5M
Characterizing the Role of Leucyl Aminoacyl tRNA Synthetase (LARS) in Breast Cancer MetastasisF30CA247026 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI PASSARELLI, MARIA CHRISTINA · 2020 to 2023
$191k
Transcriptional Determinants of L-Asparaginase Response in LeukemiaF30CA247199 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI WILLIAMS, ROBERT THOMAS · 2020 to 2022
$137k
NCI NIH HHS DP2 CA228042NCI NIH HHS F30 CA247026NCI NIH HHS F30 CA247199NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA163086NCI NIH HHS R01 CA178765NIGMS NIH HHS T32 GM007739
6 · The paper itself

Abstract

Activating transcription factor 4 (ATF4) is a master transcriptional regulator of the integrated stress response (ISR) that enables cell survival under nutrient stress. The mechanisms by which ATF4 couples metabolic stresses to specific transcriptional outputs remain unknown. Using functional genomics, we identified transcription factors that regulate the responses to distinct amino acid deprivation conditions. While ATF4 is universally required under amino acid starvation, our screens yielded a transcription factor, Zinc Finger and BTB domain-containing protein 1 (ZBTB1), as uniquely essential under asparagine deprivation. ZBTB1 knockout cells are unable to synthesize asparagine due to reduced expression of asparagine synthetase (ASNS), the enzyme responsible for asparagine synthesis. Mechanistically, ZBTB1 binds to the ASNS promoter and promotes ASNS transcription. Finally, loss of ZBTB1 sensitizes therapy-resistant T cell leukemia cells to L-asparaginase, a chemotherapeutic that depletes serum asparagine. Our work reveals a critical regulator of the nutrient stress response that may be of therapeutic value.

Indexed as

LeukemiaAnimalsAsparagineAspartate-Ammonia LigaseCell Line, TumorCell ProliferationGene Expression RegulationHumansMice, Inbred NODMice, SCIDRepressor ProteinsTranscription, GeneticAsparagineAspartate-Ammonia LigaseRepressor ProteinsZBTB1 protein, humanasparaginaseATF4cancer metabolismCRISPRgenetic screenleukemiatranscription

Identifiers

PMID32268116
PMCPMC7219601
OpenAlexW3014515630

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.