Evidence map›Paper›PMID 32267842›Full record

ArticlePloS one2020

Mapping quantitative trait loci associated with leaf rust resistance in five spring wheat populations using single nucleotide polymorphism markers.

Firdissa E Bokore, Ron E Knox, Richard D Cuthbert, Curtis J Pozniak, Brent D McCallum, Amidou N'Diaye, Ron M DePauw, Heather L Campbell, Catherine Munro, Arti Singh and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
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  6. Article
  7. Genetic mapping of the wheat leaf rust resistance gene Lr2a and its importance in Canadian wheat cultivars.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  8. Article
  9. Article
  10. Genetic mapping of leaf rust (Frontiers in plant science · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Comparison of single-trait and multi-trait genomic predictions on agronomic and disease resistance traits in spring wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  15. Article
  16. Article
  17. Meta-QTLs, ortho-MetaQTLs and candidate genes for grain Fe and Zn contents in wheat (Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 3 countries.

Firdissa E BokoreSwift Current Research and Development Center, Agriculture and Agri-Food Canada, Swift Current, Canada.ORCID 0000-0002-1073-9816
Ron E KnoxSwift Current Research and Development Center, Agriculture and Agri-Food Canada, Swift Current, Canada.
Richard D CuthbertSwift Current Research and Development Center, Agriculture and Agri-Food Canada, Swift Current, Canada.
Curtis J PozniakDepartment of Plant Sciences, University of Saskatchewan, Saskatoon, Canada.
Brent D McCallumMorden Research and Development Centre, Agriculture and Agri-Food Canada, Morden, Canada.
Amidou N'DiayeDepartment of Plant Sciences, University of Saskatchewan, Saskatoon, Canada.
Ron M DePauwAdvancing Wheat Technologies, Swift Current, Canada.
Heather L CampbellSwift Current Research and Development Center, Agriculture and Agri-Food Canada, Swift Current, Canada.
Catherine MunroPlant and Food Research, Canterbury Agriculture and Science Centre, Lincoln, New Zealand.
Arti SinghDepartment of Agronomy, Iowa State University, Ames, IA, United States of America.
Colin W HiebertMorden Research and Development Centre, Agriculture and Agri-Food Canada, Morden, Canada.
Curt A McCartneyMorden Research and Development Centre, Agriculture and Agri-Food Canada, Morden, Canada.
Andrew G SharpeGlobal Institute for Food Security, University of Saskatchewan, Saskatoon, Canada.
Asheesh K SinghDepartment of Agronomy, Iowa State University, Ames, IA, United States of America.
Dean SpanerDepartment of Agricultural, Food and Nutritional Science, 4-10N Agriculture-Forestry Centre, University of Alberta, Edmonton, Canada.
D B FowlerDepartment of Plant Sciences, University of Saskatchewan, Saskatoon, Canada.
Yuefeng RuanSwift Current Research and Development Center, Agriculture and Agri-Food Canada, Swift Current, Canada.
Samia BerraiesSwift Current Research and Development Center, Agriculture and Agri-Food Canada, Swift Current, Canada.
Brad MeyerSwift Current Research and Development Center, Agriculture and Agri-Food Canada, Swift Current, Canada.
Agriculture and Agri-Food Canada · CAUniversity of Saskatchewan · CAIowa State University · USMillar College of the Bible · CAPlant & Food Research · NZUniversity of Alberta · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Growing resistant wheat (Triticum aestivum L) varieties is an important strategy for the control of leaf rust, caused by Puccinia triticina Eriks. This study sought to identify the chromosomal location and effects of leaf rust resistance loci in five Canadian spring wheat cultivars. The parents and doubled haploid lines of crosses Carberry/AC Cadillac, Carberry/Vesper, Vesper/Lillian, Vesper/Stettler and Stettler/Red Fife were assessed for leaf rust severity and infection response in field nurseries in Canada near Swift Current, SK from 2013 to 2015, Morden, MB from 2015 to 2017 and Brandon, MB in 2016, and in New Zealand near Lincoln in 2014. The populations were genotyped with the 90K Infinium iSelect assay and quantitative trait loci (QTL) analysis was performed. A high density consensus map generated based on 14 doubled haploid populations and integrating SNP and SSR markers was used to compare QTL identified in different populations. AC Cadillac contributed QTL on chromosomes 2A, 3B and 7B (2 loci), Carberry on 1A, 2B (2 loci), 2D, 4B (2 loci), 5A, 6A, 7A and 7D, Lillian on 4A and 7D, Stettler on 2D and 6B, Vesper on 1B, 1D, 2A, 6B and 7B (2 loci), and Red Fife on 7A and 7B. Lillian contributed to a novel locus QLr.spa-4A, and similarly Carberry at QLr.spa-5A. The discovery of novel leaf rust resistance QTL QLr.spa-4A and QLr.spa-5A, and several others in contemporary Canada Western Red Spring wheat varieties is a tremendous addition to our present knowledge of resistance gene deployment in breeding. Carberry demonstrated substantial stacking of genes which could be supplemented with the genes identified in other cultivars with the expectation of increasing efficacy of resistance to leaf rust and longevity with little risk of linkage drag.

Indexed as

Polymorphism, Single NucleotideBasidiomycotaDisease ResistanceGenetic MarkersPlant DiseasesQuantitative Trait LociTriticumGenetic Markers

Identifiers

PMID32267842
PMCPMC7141615
OpenAlexW3014338003

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.