Evidence map›Paper›PMID 32267616›Full record

ArticleMicrobial biotechnology2020

Pseudomonas putida KT2440 is naturally endowed to withstand industrial-scale stress conditions.

Andreas Ankenbauer, Richard A Schäfer, Sandra C Viegas, Vânia Pobre, Björn Voß, Cecília M Arraiano, Ralf Takors

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
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  8. Review
  9. Article
  10. Exploring the Metabolic Response of Pseudomonas putida to L-arginine.Advances in experimental medicine and biology · 2025
    Article
  11. Growth Characteristics ofMycobiology · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Journal of bacteriology · 2024
    Review
  17. Reliable Genomic Integration Sites inACS synthetic biology · 2024
    Article
  18. Article
  19. A Genetically Encoded Biosensor for the Detection of Levulinic Acid.Journal of microbiology and biotechnology · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Andreas AnkenbauerInstitute of Biochemical Engineering, University of Stuttgart, Allmandring 31, 70569, Stuttgart, Germany.ORCID 0000-0002-2843-683X
Richard A SchäferInstitute of Biochemical Engineering, University of Stuttgart, Allmandring 31, 70569, Stuttgart, Germany.ORCID 0000-0001-9938-1920
Sandra C ViegasITQB, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Av. da República, 2780-157, Oeiras, Portugal.ORCID 0000-0003-3832-7474
Vânia PobreITQB, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Av. da República, 2780-157, Oeiras, Portugal.ORCID 0000-0002-4339-8472
Björn VoßInstitute of Biochemical Engineering, University of Stuttgart, Allmandring 31, 70569, Stuttgart, Germany.ORCID 0000-0002-5377-2800
Cecília M ArraianoITQB, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Av. da República, 2780-157, Oeiras, Portugal.ORCID 0000-0003-1934-9301
Ralf TakorsInstitute of Biochemical Engineering, University of Stuttgart, Allmandring 31, 70569, Stuttgart, Germany.ORCID 0000-0001-5837-6906
University of Stuttgart · DEUniversidade Nova de Lisboa · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas putida is recognized as a very promising strain for industrial application due to its high redox capacity and frequently observed tolerance towards organic solvents. In this research, we studied the metabolic and transcriptional response of P. putida KT2440 exposed to large-scale heterogeneous mixing conditions in the form of repeated glucose shortage. Cellular responses were mimicked in an experimental setup comprising a stirred tank reactor and a connected plug flow reactor. We deciphered that a stringent response-like transcriptional regulation programme is frequently induced, which seems to be linked to the intracellular pool of 3-hydroxyalkanoates (3-HA) that are known to serve as precursors for polyhydroxyalkanoates (PHA). To be precise, P. putida is endowed with a survival strategy likely to access cellular PHA, amino acids and glycogen in few seconds under glucose starvation to obtain ATP from respiration, thereby replenishing the reduced ATP levels and the adenylate energy charge. Notably, cells only need 0.4% of glucose uptake to build those 3-HA-based energy buffers. Concomitantly, genes that are related to amino acid catabolism and β-oxidation are upregulated during the transient absence of glucose. Furthermore, we provide a detailed list of transcriptional short- and long-term responses that increase the cellular maintenance by about 17% under the industrial-like conditions tested.

Indexed as

PolyhydroxyalkanoatesPseudomonas putidaPolyhydroxyalkanoates

Identifiers

PMID32267616
PMCPMC7264900
OpenAlexW3014845627

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.