Evidence map›Paper›PMID 32267018›Full record

ArticleEnvironmental and molecular mutagenesis2020

Thirdhand smoke exposure causes replication stress and impaired transcription in human lung cells.

Altaf H Sarker, Kelly S Trego, Weiguo Zhang, Peyton Jacob, Antoine M Snijders, Jian-Hua Mao, Suzaynn F Schick, Priscilla K Cooper, Bo Hang

Open access · greenAbstract read
In one paragraph

Article in Environmental and molecular mutagenesis, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Altaf H SarkerBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Kelly S TregoBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Weiguo ZhangBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Peyton JacobDivision of Cardiology, Department of Medicine, Clinical Pharmacology Program, University of California, San Francisco, California, USA.
Antoine M SnijdersBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Jian-Hua MaoBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Suzaynn F SchickDivision of Occupational and Environmental Medicine, Department of Medicine, University of California, San Francisco, California, USA.
Priscilla K CooperBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Bo HangBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Lawrence Berkeley National Laboratory · USUniversity of California, San Francisco · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI WALTER J. CHAZIN · 2001 to 2026
$89.6M
Research Support CoreP30DA012393 · NIDA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JACOB, PEYTON · 1999 to 2024
$17.1M
NCI NIH HHS P01 CA092584NIDA NIH HHS P30 DA012393University of California 26IR-0017University of California 28PT-0077
6 · The paper itself

Abstract

Thirdhand cigarette smoke (THS) is a newly described toxin that lingers in the indoor environment long after cigarettes have been extinguished. Emerging results from both cellular and animal model studies suggest that THS is a potential human health hazard. DNA damage derived from THS exposure could have genotoxic consequences that would lead to the development of diseases. However, THS exposure-induced interference with fundamental DNA transactions such as replication and transcription, and the role of DNA repair in ameliorating such effects, remain unexplored. Here, we found that THS exposure increased the percentage of cells in S-phase, suggesting impaired S-phase progression. Key DNA damage response proteins including RPA, ATR, ATM, CHK1, and BRCA1 were activated in lung cells exposed to THS, consistent with replication stress. In addition, THS exposure caused increased 53BP1 foci, indicating DNA double-strand break induction. Consistent with these results, we observed increased micronuclei formation, a marker of genomic instability, in THS-exposed cells. Exposure to THS also caused a significant increase in phosphorylated RNA Polymerase II engaged in transcription elongation, suggesting an increase in transcription-blocking lesions. In agreement with this conclusion, ongoing RNA synthesis was very significantly reduced by THS exposure. Loss of nucleotide excision repair exacerbated the reduction in RNA synthesis, suggesting that bulky DNA adducts formed by THS are blocks to transcription. The adverse impact on both replication and transcription supports genotoxic stress as a result of THS exposure, with important implications for both cancer and other diseases.

Indexed as

Air PollutantsAir Pollution, IndoorCell LineDNA DamageDNA ReplicationHumansMicronucleus TestsS Phase Cell Cycle CheckpointsTobacco Smoke PollutionTranscription, GeneticAir PollutantsTobacco Smoke PollutionDNA damage responseDNA double-strand breaksDNA repairmicronuclei frequencystalled RNA polymerasetobacco smoking

Identifiers

PMID32267018
PMCPMC7363442
OpenAlexW3014188122

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.