Evidence map›Paper›PMID 32265994›Full record

ArticleCellular & molecular biology letters2020

TCF 4 tumor suppressor: a molecular target in the prognosis of sporadic colorectal cancer in humans.

Mumtaz Anwar, Pooja Malhotra, Rakesh Kochhar, Alka Bhatia, Akhtar Mahmood, Rajinder Singh, Safrun Mahmood

Open access · goldAbstract read
In one paragraph

Article in Cellular & molecular biology letters, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Mumtaz Anwar1Department of Experimental Medicine and Biotechnology, PGIMER, Chandigarh, 160012 India.
Pooja Malhotra2Department of Gastroenterology, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012 India.
Rakesh Kochhar2Department of Gastroenterology, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012 India.
Alka Bhatia1Department of Experimental Medicine and Biotechnology, PGIMER, Chandigarh, 160012 India.
Akhtar Mahmood5Department of Biochemistry, Panjab University, Chandigarh, 160014 India.
Rajinder Singh6Department of Surgery, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012 India.
Safrun Mahmood1Department of Experimental Medicine and Biotechnology, PGIMER, Chandigarh, 160012 India.
Post Graduate Institute of Medical Education and Research · INPanjab University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA huge array of function is played by the Wnt/β-catenin signaling pathway in development by balancing gene expression through the modulation of cell-specific DNA binding downstream effectors such as T-cell factor/lymphoid enhancer factor (TCF/LEF). The β-catenin/TCF-4 complex is a central regulatory switch for differentiation and proliferation of intestinal cells (both normal and malignant). Thus, in the present study we evaluated each of 60 cases of sporadic adenocarcinoma, alongside adjoining and normal mucosa specimens of colorectum in humans, for mutation and expression analysis of the gene coding for TCF-4 protein.

methodsDNA sequencing following PCR amplification and SSCP analysis (single strand conformation polymorphism) was employed to detect TCF-4 gene mutations in the case of exon 1. Quantitative real-time (qRT) PCR, immunohistochemistry (IHC), confocal microscopy and western blot analysis were used to detect TCF-4 gene/protein expression.

resultsSequencing analysis confirmed 5/60 patients with a point mutation in exon 1 of the TCF-4 gene in tumor samples. mRNA expression using qRT-PCR showed approximately 83% decreased TCF-4 mRNA expression in tumor tissue and adjoining mucosa compared to normal mucosa. Similarly, a significant decrease in protein expression using IHC showed decreased TCF-4 protein expression in tumor tissue and adjoining mucosa compared to normal mucosa, which also corresponds to some important clinicopathological factors, including disease metastasis and tumor grade. Mutational alterations and downregulation of

conclusionsA remarkable decrease in TCF-4 mRNA and protein expression was detected in tumorous and adjoining tissues compared to normal mucosa. Hence the alterations in genomic architecture along with downregulation of

Indexed as

AdenocarcinomaAdultAgedAged, 80 and overbeta CateninColorectal NeoplasmsDisease-Free SurvivalDown-RegulationExonsFemaleGene Expression Regulation, NeoplasticHumansImmunohistochemistryMaleMicroscopy, ConfocalMiddle Agedbeta CateninTCF4 protein, humanTranscription Factor 4Tumor Suppressor ProteinsClinicopathological factorsConfocal microscopyGenetic alterationsIHCQuantitative real-time PCRTCF-4Western blotting

Identifiers

PMID32265994
PMCPMC7110825
OpenAlexW3014614891

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.